Hb_120357_010

Information

Type -
Description -
Location Contig120357: 240-1422
Sequence    

Annotation

kegg
ID rcu:RCOM_0091750
description Receptor protein kinase CLAVATA1 precursor, putative (EC:1.3.1.74)
nr
ID XP_002526749.1
description Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
swissprot
ID Q9FL51
description Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1
trembl
ID B9SL80
description Receptor protein kinase CLAVATA1, putative OS=Ricinus communis GN=RCOM_0091750 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probably inactive leucine-rich repeat receptor-like protein kinase at5g06940

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120357_010 0.0 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
2 Hb_000561_040 0.0978485141 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
3 Hb_049438_020 0.1020468788 - - PREDICTED: peroxidase 20 [Jatropha curcas]
4 Hb_170861_010 0.1071316286 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
5 Hb_004397_010 0.1204148347 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
6 Hb_113945_010 0.120433987 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
7 Hb_000934_180 0.1209860642 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
8 Hb_000106_060 0.122945615 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
9 Hb_000327_100 0.1294885035 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
10 Hb_000389_100 0.1301723036 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
11 Hb_000011_320 0.1323667452 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
12 Hb_001675_020 0.1338862698 - - -
13 Hb_000659_050 0.1400147653 - - PREDICTED: basic blue protein-like [Jatropha curcas]
14 Hb_002869_090 0.140870053 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
15 Hb_003304_090 0.1415317899 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
16 Hb_007161_020 0.1434326235 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
17 Hb_162815_010 0.1446239623 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
18 Hb_001856_260 0.151700098 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
19 Hb_000069_150 0.1608483947 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
20 Hb_027400_020 0.1619434221 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_120357_010 Hb_120357_010 Hb_000561_040 Hb_000561_040 Hb_120357_010--Hb_000561_040 Hb_049438_020 Hb_049438_020 Hb_120357_010--Hb_049438_020 Hb_170861_010 Hb_170861_010 Hb_120357_010--Hb_170861_010 Hb_004397_010 Hb_004397_010 Hb_120357_010--Hb_004397_010 Hb_113945_010 Hb_113945_010 Hb_120357_010--Hb_113945_010 Hb_000934_180 Hb_000934_180 Hb_120357_010--Hb_000934_180 Hb_000389_100 Hb_000389_100 Hb_000561_040--Hb_000389_100 Hb_002869_090 Hb_002869_090 Hb_000561_040--Hb_002869_090 Hb_000659_050 Hb_000659_050 Hb_000561_040--Hb_000659_050 Hb_027400_020 Hb_027400_020 Hb_000561_040--Hb_027400_020 Hb_000561_040--Hb_049438_020 Hb_049438_020--Hb_000389_100 Hb_001856_260 Hb_001856_260 Hb_049438_020--Hb_001856_260 Hb_162815_010 Hb_162815_010 Hb_049438_020--Hb_162815_010 Hb_000685_100 Hb_000685_100 Hb_049438_020--Hb_000685_100 Hb_000106_060 Hb_000106_060 Hb_170861_010--Hb_000106_060 Hb_170861_010--Hb_113945_010 Hb_170861_010--Hb_000934_180 Hb_039096_010 Hb_039096_010 Hb_170861_010--Hb_039096_010 Hb_002876_190 Hb_002876_190 Hb_170861_010--Hb_002876_190 Hb_059226_020 Hb_059226_020 Hb_004397_010--Hb_059226_020 Hb_004397_010--Hb_162815_010 Hb_006351_040 Hb_006351_040 Hb_004397_010--Hb_006351_040 Hb_030088_010 Hb_030088_010 Hb_004397_010--Hb_030088_010 Hb_066207_020 Hb_066207_020 Hb_004397_010--Hb_066207_020 Hb_113945_010--Hb_000106_060 Hb_113945_010--Hb_039096_010 Hb_113945_010--Hb_000934_180 Hb_007161_020 Hb_007161_020 Hb_113945_010--Hb_007161_020 Hb_113945_010--Hb_002876_190 Hb_000934_180--Hb_039096_010 Hb_000934_180--Hb_000106_060 Hb_000934_180--Hb_002876_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.119226 0.231232 2.9175 0 0.0323048
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.07911 0.399173

CAGE analysis