Hb_120982_010

Information

Type -
Description -
Location Contig120982: 75-491
Sequence    

Annotation

kegg
ID cic:CICLE_v10003116mg
description hypothetical protein
nr
ID XP_006432632.1
description hypothetical protein CICLE_v10003116mg, partial [Citrus clementina]
swissprot
ID A6NM15
description Putative COBW domain-containing protein 7 OS=Homo sapiens GN=CBWD7 PE=5 SV=3
trembl
ID V4SYI3
description Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10003116mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120982_010 0.0 - - hypothetical protein CICLE_v10003116mg, partial [Citrus clementina]
2 Hb_000035_110 0.0781657486 - - PREDICTED: transcription initiation factor TFIID subunit 5 [Jatropha curcas]
3 Hb_000617_010 0.0815282072 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
4 Hb_007831_010 0.0894133648 - - PREDICTED: oligoribonuclease [Vitis vinifera]
5 Hb_004020_040 0.0895466128 - - PREDICTED: GTP-binding protein At3g49725, chloroplastic [Jatropha curcas]
6 Hb_001922_150 0.0901058185 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
7 Hb_010150_020 0.0929476051 transcription factor TF Family: HMG PREDICTED: FACT complex subunit SSRP1 [Jatropha curcas]
8 Hb_000731_220 0.0938131143 - - PREDICTED: derlin-2.2 [Jatropha curcas]
9 Hb_000107_230 0.094709781 - - unknown [Medicago truncatula]
10 Hb_019280_030 0.0964655404 - - -
11 Hb_001377_310 0.0966963957 transcription factor TF Family: Coactivator p15 PREDICTED: uncharacterized protein LOC105642839 [Jatropha curcas]
12 Hb_021374_010 0.0967745869 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-A1 [Populus euphratica]
13 Hb_002986_100 0.0991610944 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
14 Hb_007441_020 0.1003521349 - - Rab6 [Hevea brasiliensis]
15 Hb_006588_170 0.1017315308 - - PREDICTED: OTU domain-containing protein At3g57810 [Jatropha curcas]
16 Hb_000207_150 0.1029041377 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
17 Hb_000120_210 0.1031009728 - - PREDICTED: uncharacterized protein LOC105630189 [Jatropha curcas]
18 Hb_001635_160 0.1037865203 - - hypothetical protein JCGZ_24810 [Jatropha curcas]
19 Hb_000239_060 0.1050067709 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000331_090 0.1053509689 - - hypothetical protein PRUPE_ppa010923mg [Prunus persica]

Gene co-expression network

sample Hb_120982_010 Hb_120982_010 Hb_000035_110 Hb_000035_110 Hb_120982_010--Hb_000035_110 Hb_000617_010 Hb_000617_010 Hb_120982_010--Hb_000617_010 Hb_007831_010 Hb_007831_010 Hb_120982_010--Hb_007831_010 Hb_004020_040 Hb_004020_040 Hb_120982_010--Hb_004020_040 Hb_001922_150 Hb_001922_150 Hb_120982_010--Hb_001922_150 Hb_010150_020 Hb_010150_020 Hb_120982_010--Hb_010150_020 Hb_001377_310 Hb_001377_310 Hb_000035_110--Hb_001377_310 Hb_000005_220 Hb_000005_220 Hb_000035_110--Hb_000005_220 Hb_000035_110--Hb_004020_040 Hb_001635_160 Hb_001635_160 Hb_000035_110--Hb_001635_160 Hb_005460_050 Hb_005460_050 Hb_000035_110--Hb_005460_050 Hb_000035_110--Hb_010150_020 Hb_001856_180 Hb_001856_180 Hb_000617_010--Hb_001856_180 Hb_000345_160 Hb_000345_160 Hb_000617_010--Hb_000345_160 Hb_000107_230 Hb_000107_230 Hb_000617_010--Hb_000107_230 Hb_000617_010--Hb_010150_020 Hb_004102_170 Hb_004102_170 Hb_000617_010--Hb_004102_170 Hb_006153_070 Hb_006153_070 Hb_007831_010--Hb_006153_070 Hb_003430_050 Hb_003430_050 Hb_007831_010--Hb_003430_050 Hb_000207_150 Hb_000207_150 Hb_007831_010--Hb_000207_150 Hb_015807_050 Hb_015807_050 Hb_007831_010--Hb_015807_050 Hb_007831_010--Hb_000107_230 Hb_006588_170 Hb_006588_170 Hb_007831_010--Hb_006588_170 Hb_021374_010 Hb_021374_010 Hb_004020_040--Hb_021374_010 Hb_001040_100 Hb_001040_100 Hb_004020_040--Hb_001040_100 Hb_000227_220 Hb_000227_220 Hb_004020_040--Hb_000227_220 Hb_004020_040--Hb_001377_310 Hb_004020_040--Hb_001922_150 Hb_000976_140 Hb_000976_140 Hb_001922_150--Hb_000976_140 Hb_019280_030 Hb_019280_030 Hb_001922_150--Hb_019280_030 Hb_000313_220 Hb_000313_220 Hb_001922_150--Hb_000313_220 Hb_005730_040 Hb_005730_040 Hb_001922_150--Hb_005730_040 Hb_007416_340 Hb_007416_340 Hb_001922_150--Hb_007416_340 Hb_010150_020--Hb_001377_310 Hb_003688_090 Hb_003688_090 Hb_010150_020--Hb_003688_090 Hb_010150_020--Hb_021374_010 Hb_029904_020 Hb_029904_020 Hb_010150_020--Hb_029904_020 Hb_010150_020--Hb_004020_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.17245 8.09426 12.3478 10.5317 6.36297 16.3211
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.0937 9.00693 4.80604 6.50047 9.0031

CAGE analysis