Hb_121313_010

Information

Type -
Description -
Location Contig121313: 264-886
Sequence    

Annotation

kegg
ID rcu:RCOM_1450190
description endo-1,4-beta-glucanase, putative (EC:3.2.1.4)
nr
ID XP_012084447.1
description PREDICTED: endoglucanase 24-like [Jatropha curcas]
swissprot
ID Q93YQ7
description Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1
trembl
ID A0A067K759
description Endoglucanase OS=Jatropha curcas GN=JCGZ_19649 PE=3 SV=1
Gene Ontology
ID GO:0008810
description endoglucanase 24-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121313_010 0.0 - - PREDICTED: endoglucanase 24-like [Jatropha curcas]
2 Hb_000627_040 0.0697197019 - - leucine-rich repeat protein, putative [Ricinus communis]
3 Hb_004218_140 0.081411007 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]
4 Hb_001269_060 0.084425614 - - PREDICTED: probable receptor-like protein kinase At1g80640 isoform X1 [Jatropha curcas]
5 Hb_000086_470 0.0884547073 - - hypothetical protein JCGZ_17645 [Jatropha curcas]
6 Hb_001377_120 0.090876284 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
7 Hb_007632_160 0.0953486819 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000120_340 0.0971416778 - - Cucumisin precursor, putative [Ricinus communis]
9 Hb_000302_360 0.0974283643 - - beta-carotene hydroxylase, putative [Ricinus communis]
10 Hb_008304_010 0.0976109515 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]
11 Hb_002053_180 0.0992006691 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
12 Hb_001157_050 0.099580376 - - cation efflux protein/ zinc transporter, putative [Ricinus communis]
13 Hb_007237_020 0.100836282 - - PREDICTED: protein trichome birefringence-like 23 [Jatropha curcas]
14 Hb_128196_010 0.1018873295 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005892_050 0.1027016513 - - PREDICTED: uncharacterized protein LOC105632175 [Jatropha curcas]
16 Hb_003666_070 0.1027413463 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
17 Hb_006922_020 0.1045907094 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
18 Hb_002518_040 0.1060221206 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
19 Hb_000418_170 0.106552162 - - PREDICTED: ABC transporter C family member 12-like isoform X4 [Populus euphratica]
20 Hb_001488_420 0.109910381 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]

Gene co-expression network

sample Hb_121313_010 Hb_121313_010 Hb_000627_040 Hb_000627_040 Hb_121313_010--Hb_000627_040 Hb_004218_140 Hb_004218_140 Hb_121313_010--Hb_004218_140 Hb_001269_060 Hb_001269_060 Hb_121313_010--Hb_001269_060 Hb_000086_470 Hb_000086_470 Hb_121313_010--Hb_000086_470 Hb_001377_120 Hb_001377_120 Hb_121313_010--Hb_001377_120 Hb_007632_160 Hb_007632_160 Hb_121313_010--Hb_007632_160 Hb_002490_060 Hb_002490_060 Hb_000627_040--Hb_002490_060 Hb_007237_020 Hb_007237_020 Hb_000627_040--Hb_007237_020 Hb_005730_110 Hb_005730_110 Hb_000627_040--Hb_005730_110 Hb_002053_180 Hb_002053_180 Hb_000627_040--Hb_002053_180 Hb_006922_020 Hb_006922_020 Hb_000627_040--Hb_006922_020 Hb_004602_010 Hb_004602_010 Hb_004218_140--Hb_004602_010 Hb_001488_420 Hb_001488_420 Hb_004218_140--Hb_001488_420 Hb_005892_050 Hb_005892_050 Hb_004218_140--Hb_005892_050 Hb_008304_010 Hb_008304_010 Hb_004218_140--Hb_008304_010 Hb_004218_140--Hb_000627_040 Hb_001269_060--Hb_001377_120 Hb_000645_260 Hb_000645_260 Hb_001269_060--Hb_000645_260 Hb_000302_360 Hb_000302_360 Hb_001269_060--Hb_000302_360 Hb_001269_060--Hb_004218_140 Hb_027684_010 Hb_027684_010 Hb_001269_060--Hb_027684_010 Hb_000086_470--Hb_007237_020 Hb_000120_340 Hb_000120_340 Hb_000086_470--Hb_000120_340 Hb_004202_030 Hb_004202_030 Hb_000086_470--Hb_004202_030 Hb_007313_030 Hb_007313_030 Hb_000086_470--Hb_007313_030 Hb_000086_470--Hb_007632_160 Hb_000086_470--Hb_000627_040 Hb_001377_120--Hb_000645_260 Hb_001377_120--Hb_000302_360 Hb_033006_020 Hb_033006_020 Hb_001377_120--Hb_033006_020 Hb_006816_250 Hb_006816_250 Hb_001377_120--Hb_006816_250 Hb_001157_050 Hb_001157_050 Hb_007632_160--Hb_001157_050 Hb_000418_110 Hb_000418_110 Hb_007632_160--Hb_000418_110 Hb_007632_160--Hb_000120_340 Hb_004122_010 Hb_004122_010 Hb_007632_160--Hb_004122_010 Hb_005675_050 Hb_005675_050 Hb_007632_160--Hb_005675_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.58762 22.5712 14.7503 0.0613916 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.153319 0.120433 0.200489 2.62516 11.2666

CAGE analysis