Hb_121540_010

Information

Type -
Description -
Location Contig121540: 315-818
Sequence    

Annotation

kegg
ID pop:POPTR_0004s06820g
description POPTRDRAFT_555562; UDP-glucoronosyl/UDP-glucosyl transferase family protein
nr
ID XP_012065642.1
description PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
swissprot
ID Q9LK73
description UDP-glycosyltransferase 88A1 OS=Arabidopsis thaliana GN=UGT88A1 PE=2 SV=1
trembl
ID B9H277
description UDP-glucoronosyl/UDP-glucosyl transferase family protein OS=Populus trichocarpa GN=POPTR_0004s06820g PE=3 SV=2
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 88a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121540_010 0.0 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
2 Hb_003060_150 0.0655507621 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_005381_010 0.0700672424 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
4 Hb_000069_530 0.0719608352 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
5 Hb_028486_010 0.0722401853 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
6 Hb_077694_010 0.0742076844 - - uncharacterized protein LOC100305624 [Glycine max]
7 Hb_001660_080 0.0898701823 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
8 Hb_000836_420 0.0955777806 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_004109_240 0.0964029629 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
10 Hb_017693_040 0.0964044123 - - tyrosine kinase family protein [Medicago truncatula]
11 Hb_000172_410 0.0967436241 - - metal ion binding protein, putative [Ricinus communis]
12 Hb_000087_200 0.0978775906 - - PREDICTED: uncharacterized protein LOC105641954 [Jatropha curcas]
13 Hb_008202_020 0.107550358 - - receptor serine/threonine kinase, putative [Ricinus communis]
14 Hb_001160_050 0.1118010404 - - PREDICTED: long-chain-alcohol oxidase FAO1 [Jatropha curcas]
15 Hb_182167_010 0.1162810824 - - hypothetical protein PHAVU_001G0486001g, partial [Phaseolus vulgaris]
16 Hb_160653_010 0.1181149079 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
17 Hb_021254_020 0.1203340477 - - calmodulin binding protein, putative [Ricinus communis]
18 Hb_001369_670 0.1205649372 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
19 Hb_001619_140 0.121705498 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
20 Hb_002400_020 0.1235292157 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]

Gene co-expression network

sample Hb_121540_010 Hb_121540_010 Hb_003060_150 Hb_003060_150 Hb_121540_010--Hb_003060_150 Hb_005381_010 Hb_005381_010 Hb_121540_010--Hb_005381_010 Hb_000069_530 Hb_000069_530 Hb_121540_010--Hb_000069_530 Hb_028486_010 Hb_028486_010 Hb_121540_010--Hb_028486_010 Hb_077694_010 Hb_077694_010 Hb_121540_010--Hb_077694_010 Hb_001660_080 Hb_001660_080 Hb_121540_010--Hb_001660_080 Hb_003060_150--Hb_000069_530 Hb_003060_150--Hb_005381_010 Hb_003060_150--Hb_028486_010 Hb_003060_150--Hb_001660_080 Hb_009252_090 Hb_009252_090 Hb_003060_150--Hb_009252_090 Hb_005381_010--Hb_000069_530 Hb_182167_010 Hb_182167_010 Hb_005381_010--Hb_182167_010 Hb_005381_010--Hb_001660_080 Hb_005381_010--Hb_077694_010 Hb_000069_530--Hb_077694_010 Hb_000592_070 Hb_000592_070 Hb_000069_530--Hb_000592_070 Hb_000069_530--Hb_001660_080 Hb_000087_200 Hb_000087_200 Hb_028486_010--Hb_000087_200 Hb_004109_240 Hb_004109_240 Hb_028486_010--Hb_004109_240 Hb_021254_020 Hb_021254_020 Hb_028486_010--Hb_021254_020 Hb_160653_010 Hb_160653_010 Hb_028486_010--Hb_160653_010 Hb_017693_040 Hb_017693_040 Hb_077694_010--Hb_017693_040 Hb_077694_010--Hb_001660_080 Hb_120011_010 Hb_120011_010 Hb_077694_010--Hb_120011_010 Hb_000836_420 Hb_000836_420 Hb_001660_080--Hb_000836_420 Hb_000035_140 Hb_000035_140 Hb_001660_080--Hb_000035_140 Hb_189208_060 Hb_189208_060 Hb_001660_080--Hb_189208_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 23.1468 23.9787 9.36198 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.21053 3.11848

CAGE analysis