Hb_121624_010

Information

Type -
Description -
Location Contig121624: 20642-22718
Sequence    

Annotation

kegg
ID rcu:RCOM_0867850
description hypothetical protein
nr
ID XP_012072656.1
description PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L150
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06587: 22444-22748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121624_010 0.0 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
2 Hb_002245_060 0.0965288789 - - PREDICTED: kinesin-3 isoform X1 [Jatropha curcas]
3 Hb_001269_660 0.1009693595 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
4 Hb_025623_010 0.1051407946 - - -
5 Hb_011501_020 0.1063777946 - - PREDICTED: uncharacterized protein LOC105648929 [Jatropha curcas]
6 Hb_001408_200 0.1072931814 - - hypothetical protein JCGZ_08964 [Jatropha curcas]
7 Hb_000402_060 0.1072961979 - - PREDICTED: uncharacterized protein LOC105644642 isoform X2 [Jatropha curcas]
8 Hb_000654_020 0.1104232181 - - hypothetical protein CICLE_v10006262mg [Citrus clementina]
9 Hb_011519_040 0.1147581696 - - hypothetical protein POPTR_0015s04770g [Populus trichocarpa]
10 Hb_000122_230 0.1190454499 - - laccase, putative [Ricinus communis]
11 Hb_000910_060 0.1204768854 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
12 Hb_000866_400 0.121627328 - - -
13 Hb_022973_010 0.1216315245 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Jatropha curcas]
14 Hb_002925_060 0.1241980692 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01547 [Jatropha curcas]
15 Hb_002400_300 0.1253998046 - - PREDICTED: synaptotagmin-4 [Jatropha curcas]
16 Hb_006992_010 0.1292759329 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
17 Hb_000620_050 0.1305575168 - - PREDICTED: uncharacterized protein LOC105649924 [Jatropha curcas]
18 Hb_010883_160 0.1308022303 - - PREDICTED: pathogenesis-related protein 5 isoform X1 [Jatropha curcas]
19 Hb_006920_020 0.1313735571 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
20 Hb_000103_440 0.1354708951 - - hypothetical protein POPTR_0008s15900g [Populus trichocarpa]

Gene co-expression network

sample Hb_121624_010 Hb_121624_010 Hb_002245_060 Hb_002245_060 Hb_121624_010--Hb_002245_060 Hb_001269_660 Hb_001269_660 Hb_121624_010--Hb_001269_660 Hb_025623_010 Hb_025623_010 Hb_121624_010--Hb_025623_010 Hb_011501_020 Hb_011501_020 Hb_121624_010--Hb_011501_020 Hb_001408_200 Hb_001408_200 Hb_121624_010--Hb_001408_200 Hb_000402_060 Hb_000402_060 Hb_121624_010--Hb_000402_060 Hb_000122_230 Hb_000122_230 Hb_002245_060--Hb_000122_230 Hb_000654_020 Hb_000654_020 Hb_002245_060--Hb_000654_020 Hb_007620_020 Hb_007620_020 Hb_002245_060--Hb_007620_020 Hb_000670_070 Hb_000670_070 Hb_002245_060--Hb_000670_070 Hb_002245_060--Hb_001408_200 Hb_005539_150 Hb_005539_150 Hb_002245_060--Hb_005539_150 Hb_149507_010 Hb_149507_010 Hb_001269_660--Hb_149507_010 Hb_012395_060 Hb_012395_060 Hb_001269_660--Hb_012395_060 Hb_010264_010 Hb_010264_010 Hb_001269_660--Hb_010264_010 Hb_001277_010 Hb_001277_010 Hb_001269_660--Hb_001277_010 Hb_002518_230 Hb_002518_230 Hb_001269_660--Hb_002518_230 Hb_025623_010--Hb_011501_020 Hb_000866_400 Hb_000866_400 Hb_025623_010--Hb_000866_400 Hb_002370_020 Hb_002370_020 Hb_025623_010--Hb_002370_020 Hb_025623_010--Hb_149507_010 Hb_025623_010--Hb_001269_660 Hb_000343_090 Hb_000343_090 Hb_011501_020--Hb_000343_090 Hb_011501_020--Hb_000866_400 Hb_011501_020--Hb_002245_060 Hb_005622_040 Hb_005622_040 Hb_011501_020--Hb_005622_040 Hb_001408_200--Hb_000402_060 Hb_002925_060 Hb_002925_060 Hb_001408_200--Hb_002925_060 Hb_001408_200--Hb_000122_230 Hb_003152_020 Hb_003152_020 Hb_001408_200--Hb_003152_020 Hb_001397_020 Hb_001397_020 Hb_001408_200--Hb_001397_020 Hb_003058_240 Hb_003058_240 Hb_001408_200--Hb_003058_240 Hb_010883_160 Hb_010883_160 Hb_000402_060--Hb_010883_160 Hb_000402_060--Hb_003058_240 Hb_000402_060--Hb_000654_020 Hb_002809_180 Hb_002809_180 Hb_000402_060--Hb_002809_180 Hb_000402_060--Hb_001397_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0422734 0.396784 1.91441 0.0499568 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.299726 2.07688

CAGE analysis