Hb_121913_010

Information

Type -
Description -
Location Contig121913: 1411-1808
Sequence    

Annotation

kegg
ID rcu:RCOM_0885080
description Disease resistance protein RPS5, putative
nr
ID XP_002522629.1
description Disease resistance protein RPS5, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S9G0
description Disease resistance protein RPS5, putative OS=Ricinus communis GN=RCOM_0885080 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_121913_010 0.0 - - Disease resistance protein RPS5, putative [Ricinus communis]
2 Hb_158123_010 0.1354463482 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
3 Hb_000465_330 0.1374636341 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
4 Hb_136027_010 0.1443956311 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
5 Hb_035391_010 0.1461960482 - - TMV resistance protein N, putative [Ricinus communis]
6 Hb_114932_010 0.1509879484 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_003582_020 0.1551898607 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Eucalyptus grandis]
8 Hb_002311_490 0.158236704 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
9 Hb_127628_010 0.1592334106 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
10 Hb_001846_040 0.1621511431 - - cytochrome P450, putative [Ricinus communis]
11 Hb_016404_010 0.1625926409 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
12 Hb_011287_020 0.1637852669 - - ATP binding protein, putative [Ricinus communis]
13 Hb_125201_010 0.1651081887 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
14 Hb_009707_010 0.1654137876 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
15 Hb_002922_010 0.1683401967 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
16 Hb_019654_010 0.1723633131 - - multicopper oxidase, putative [Ricinus communis]
17 Hb_025477_020 0.1752669582 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
18 Hb_000506_140 0.1766965899 - - hypothetical protein PRUPE_ppb019425mg [Prunus persica]
19 Hb_002660_090 0.1767950159 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
20 Hb_041534_010 0.177555736 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]

Gene co-expression network

sample Hb_121913_010 Hb_121913_010 Hb_158123_010 Hb_158123_010 Hb_121913_010--Hb_158123_010 Hb_000465_330 Hb_000465_330 Hb_121913_010--Hb_000465_330 Hb_136027_010 Hb_136027_010 Hb_121913_010--Hb_136027_010 Hb_035391_010 Hb_035391_010 Hb_121913_010--Hb_035391_010 Hb_114932_010 Hb_114932_010 Hb_121913_010--Hb_114932_010 Hb_003582_020 Hb_003582_020 Hb_121913_010--Hb_003582_020 Hb_006483_050 Hb_006483_050 Hb_158123_010--Hb_006483_050 Hb_002311_490 Hb_002311_490 Hb_158123_010--Hb_002311_490 Hb_000210_150 Hb_000210_150 Hb_158123_010--Hb_000210_150 Hb_011287_020 Hb_011287_020 Hb_158123_010--Hb_011287_020 Hb_158123_010--Hb_035391_010 Hb_158123_010--Hb_000465_330 Hb_000465_330--Hb_002311_490 Hb_000506_140 Hb_000506_140 Hb_000465_330--Hb_000506_140 Hb_016404_010 Hb_016404_010 Hb_000465_330--Hb_016404_010 Hb_000796_200 Hb_000796_200 Hb_000465_330--Hb_000796_200 Hb_136027_010--Hb_003582_020 Hb_136027_010--Hb_016404_010 Hb_136027_010--Hb_035391_010 Hb_009247_020 Hb_009247_020 Hb_136027_010--Hb_009247_020 Hb_001846_040 Hb_001846_040 Hb_136027_010--Hb_001846_040 Hb_136027_010--Hb_000796_200 Hb_035391_010--Hb_003582_020 Hb_035391_010--Hb_000210_150 Hb_025477_020 Hb_025477_020 Hb_035391_010--Hb_025477_020 Hb_055706_010 Hb_055706_010 Hb_035391_010--Hb_055706_010 Hb_035391_010--Hb_002311_490 Hb_009707_010 Hb_009707_010 Hb_114932_010--Hb_009707_010 Hb_000338_020 Hb_000338_020 Hb_114932_010--Hb_000338_020 Hb_009683_060 Hb_009683_060 Hb_114932_010--Hb_009683_060 Hb_000904_090 Hb_000904_090 Hb_114932_010--Hb_000904_090 Hb_000086_600 Hb_000086_600 Hb_114932_010--Hb_000086_600 Hb_167802_010 Hb_167802_010 Hb_114932_010--Hb_167802_010 Hb_001289_030 Hb_001289_030 Hb_003582_020--Hb_001289_030 Hb_003582_020--Hb_025477_020 Hb_002922_010 Hb_002922_010 Hb_003582_020--Hb_002922_010 Hb_001411_150 Hb_001411_150 Hb_003582_020--Hb_001411_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.31315 30.7518 4.77902 6.6118 0.284384 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.664046 0 0 0.480357 0

CAGE analysis