Hb_122951_010

Information

Type -
Description -
Location Contig122951: 583-1948
Sequence    

Annotation

kegg
ID rcu:RCOM_1408060
description hypothetical protein
nr
ID XP_012078604.1
description PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K866
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13197 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06950: 1928-2279
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_122951_010 0.0 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
2 Hb_043630_030 0.0615158875 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
3 Hb_017862_030 0.0724190256 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
4 Hb_002522_040 0.0745129546 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
5 Hb_005111_020 0.0877218 - - hypothetical protein CISIN_1g0417821mg, partial [Citrus sinensis]
6 Hb_000849_030 0.0908830205 - - PREDICTED: fimbrin-2 [Jatropha curcas]
7 Hb_000020_210 0.0941095843 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
8 Hb_178049_010 0.0954484581 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
9 Hb_001427_100 0.1018309682 - - acc synthase, putative [Ricinus communis]
10 Hb_008021_050 0.1049099463 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_092975_010 0.1052703023 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
12 Hb_003466_010 0.1055932132 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
13 Hb_001408_080 0.1160514371 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
14 Hb_002171_020 0.1162231 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
15 Hb_153180_010 0.1180709461 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
16 Hb_000020_200 0.11886101 - - hypothetical protein EUGRSUZ_B00411 [Eucalyptus grandis]
17 Hb_154038_040 0.1201318815 - - nutrient reservoir, putative [Ricinus communis]
18 Hb_036520_030 0.1205481536 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
19 Hb_001117_180 0.1217487373 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
20 Hb_001110_060 0.1226204255 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_122951_010 Hb_122951_010 Hb_043630_030 Hb_043630_030 Hb_122951_010--Hb_043630_030 Hb_017862_030 Hb_017862_030 Hb_122951_010--Hb_017862_030 Hb_002522_040 Hb_002522_040 Hb_122951_010--Hb_002522_040 Hb_005111_020 Hb_005111_020 Hb_122951_010--Hb_005111_020 Hb_000849_030 Hb_000849_030 Hb_122951_010--Hb_000849_030 Hb_000020_210 Hb_000020_210 Hb_122951_010--Hb_000020_210 Hb_043630_030--Hb_017862_030 Hb_001427_100 Hb_001427_100 Hb_043630_030--Hb_001427_100 Hb_043630_030--Hb_000020_210 Hb_003054_070 Hb_003054_070 Hb_043630_030--Hb_003054_070 Hb_007221_040 Hb_007221_040 Hb_043630_030--Hb_007221_040 Hb_000045_080 Hb_000045_080 Hb_017862_030--Hb_000045_080 Hb_008598_010 Hb_008598_010 Hb_017862_030--Hb_008598_010 Hb_002151_020 Hb_002151_020 Hb_017862_030--Hb_002151_020 Hb_026144_040 Hb_026144_040 Hb_017862_030--Hb_026144_040 Hb_092975_010 Hb_092975_010 Hb_002522_040--Hb_092975_010 Hb_004031_050 Hb_004031_050 Hb_002522_040--Hb_004031_050 Hb_001117_180 Hb_001117_180 Hb_002522_040--Hb_001117_180 Hb_153180_010 Hb_153180_010 Hb_002522_040--Hb_153180_010 Hb_178049_010 Hb_178049_010 Hb_002522_040--Hb_178049_010 Hb_001110_060 Hb_001110_060 Hb_005111_020--Hb_001110_060 Hb_005111_020--Hb_000020_210 Hb_001408_080 Hb_001408_080 Hb_005111_020--Hb_001408_080 Hb_005111_020--Hb_001427_100 Hb_000000_320 Hb_000000_320 Hb_005111_020--Hb_000000_320 Hb_000849_030--Hb_001408_080 Hb_003466_010 Hb_003466_010 Hb_000849_030--Hb_003466_010 Hb_036520_030 Hb_036520_030 Hb_000849_030--Hb_036520_030 Hb_000849_030--Hb_001427_100 Hb_103225_030 Hb_103225_030 Hb_000849_030--Hb_103225_030 Hb_009222_040 Hb_009222_040 Hb_000020_210--Hb_009222_040 Hb_000020_210--Hb_001427_100 Hb_001405_170 Hb_001405_170 Hb_000020_210--Hb_001405_170 Hb_039946_060 Hb_039946_060 Hb_000020_210--Hb_039946_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.552526 0.688734 1.99609 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.186662 0.579553

CAGE analysis