Hb_123078_010

Information

Type -
Description -
Location Contig123078: 171-485
Sequence    

Annotation

kegg
ID cit:102620460
description putative receptor-like protein kinase At3g47110-like
nr
ID XP_012091038.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01310 PE=4 SV=1
Gene Ontology
ID GO:0016020
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123078_010 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
2 Hb_000041_160 0.0727893933 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
3 Hb_105814_020 0.0733754771 - - berberine bridge enzyme [Hevea brasiliensis]
4 Hb_027474_010 0.0871188382 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
5 Hb_002267_030 0.1044088078 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
6 Hb_011101_010 0.1065595963 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
7 Hb_004218_290 0.1096614193 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
8 Hb_002097_210 0.1100247629 - - conserved hypothetical protein [Ricinus communis]
9 Hb_145139_010 0.1232751794 - - PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Vitis vinifera]
10 Hb_002335_010 0.1271968644 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
11 Hb_001269_530 0.1299851906 - - ATP-binding cassette transporter, putative [Ricinus communis]
12 Hb_004730_010 0.1315076024 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
13 Hb_001907_050 0.132651553 - - Receptor like protein 6, putative [Theobroma cacao]
14 Hb_000365_190 0.1423543089 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
15 Hb_001677_120 0.1443103046 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
16 Hb_008550_030 0.1465188445 - - PREDICTED: tonoplast dicarboxylate transporter [Jatropha curcas]
17 Hb_000813_090 0.1469251899 - - hypothetical protein CARUB_v10019318mg [Capsella rubella]
18 Hb_001913_030 0.1540864845 - - ankyrin repeat protein [Bruguiera gymnorhiza]
19 Hb_001318_230 0.1573757421 - - Boron transporter, putative [Ricinus communis]
20 Hb_007007_090 0.1579902283 - - phospholipase d beta, putative [Ricinus communis]

Gene co-expression network

sample Hb_123078_010 Hb_123078_010 Hb_000041_160 Hb_000041_160 Hb_123078_010--Hb_000041_160 Hb_105814_020 Hb_105814_020 Hb_123078_010--Hb_105814_020 Hb_027474_010 Hb_027474_010 Hb_123078_010--Hb_027474_010 Hb_002267_030 Hb_002267_030 Hb_123078_010--Hb_002267_030 Hb_011101_010 Hb_011101_010 Hb_123078_010--Hb_011101_010 Hb_004218_290 Hb_004218_290 Hb_123078_010--Hb_004218_290 Hb_002335_010 Hb_002335_010 Hb_000041_160--Hb_002335_010 Hb_000041_160--Hb_105814_020 Hb_000041_160--Hb_027474_010 Hb_004730_010 Hb_004730_010 Hb_000041_160--Hb_004730_010 Hb_000956_100 Hb_000956_100 Hb_000041_160--Hb_000956_100 Hb_105814_020--Hb_004730_010 Hb_105814_020--Hb_027474_010 Hb_105814_020--Hb_002267_030 Hb_009403_010 Hb_009403_010 Hb_105814_020--Hb_009403_010 Hb_002097_210 Hb_002097_210 Hb_027474_010--Hb_002097_210 Hb_001989_080 Hb_001989_080 Hb_027474_010--Hb_001989_080 Hb_001046_040 Hb_001046_040 Hb_027474_010--Hb_001046_040 Hb_005714_140 Hb_005714_140 Hb_002267_030--Hb_005714_140 Hb_000260_130 Hb_000260_130 Hb_002267_030--Hb_000260_130 Hb_008550_030 Hb_008550_030 Hb_002267_030--Hb_008550_030 Hb_002820_090 Hb_002820_090 Hb_002267_030--Hb_002820_090 Hb_000365_190 Hb_000365_190 Hb_011101_010--Hb_000365_190 Hb_011101_010--Hb_004218_290 Hb_001587_220 Hb_001587_220 Hb_011101_010--Hb_001587_220 Hb_011101_010--Hb_002267_030 Hb_000252_190 Hb_000252_190 Hb_011101_010--Hb_000252_190 Hb_000742_260 Hb_000742_260 Hb_004218_290--Hb_000742_260 Hb_004218_290--Hb_000365_190 Hb_013691_060 Hb_013691_060 Hb_004218_290--Hb_013691_060 Hb_004218_290--Hb_002267_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.21074 0.114529 0.728574 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.120089 0.414522

CAGE analysis