Hb_123560_030

Information

Type -
Description -
Location Contig123560: 35925-37373
Sequence    

Annotation

kegg
ID rcu:RCOM_1154190
description UDP-glucosyltransferase, putative (EC:2.4.1.210)
nr
ID XP_002524931.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID O22183
description UDP-glycosyltransferase 84B2 OS=Arabidopsis thaliana GN=UGT84B2 PE=3 SV=1
trembl
ID B9SG12
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1154190 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 84b2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123560_030 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_000377_140 0.1973854044 - - -
3 Hb_144547_010 0.2811080254 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
4 Hb_009102_020 0.2839253898 - - hypothetical protein EUGRSUZ_I01262 [Eucalyptus grandis]
5 Hb_005542_100 0.2886486216 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0013s03910g [Populus trichocarpa]
6 Hb_001449_060 0.2907990883 - - kelch repeat protein, putative [Ricinus communis]
7 Hb_001001_050 0.3019819632 - - CXE protein [Hevea brasiliensis]
8 Hb_001077_020 0.3097905144 - - hypothetical protein JCGZ_23832 [Jatropha curcas]
9 Hb_000982_150 0.3103093975 transcription factor TF Family: Orphans histidine kinase 1 plant, putative [Ricinus communis]
10 Hb_000184_140 0.3135231937 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000663_030 0.3139226907 - - -
12 Hb_000347_090 0.3145102984 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]
13 Hb_002235_270 0.317388303 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
14 Hb_011903_010 0.320496139 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_000624_020 0.3223607061 transcription factor TF Family: NAC NAC transcription factor 004 [Jatropha curcas]
16 Hb_119960_010 0.3253634931 - - PREDICTED: pectinesterase-like [Populus euphratica]
17 Hb_000472_010 0.3276972972 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_002847_020 0.3284357272 - - hypothetical protein JCGZ_23832 [Jatropha curcas]
19 Hb_101705_020 0.3296429508 - - conserved hypothetical protein [Ricinus communis]
20 Hb_023051_010 0.3298061525 - - PREDICTED: putative amidase C869.01 [Populus euphratica]

Gene co-expression network

sample Hb_123560_030 Hb_123560_030 Hb_000377_140 Hb_000377_140 Hb_123560_030--Hb_000377_140 Hb_144547_010 Hb_144547_010 Hb_123560_030--Hb_144547_010 Hb_009102_020 Hb_009102_020 Hb_123560_030--Hb_009102_020 Hb_005542_100 Hb_005542_100 Hb_123560_030--Hb_005542_100 Hb_001449_060 Hb_001449_060 Hb_123560_030--Hb_001449_060 Hb_001001_050 Hb_001001_050 Hb_123560_030--Hb_001001_050 Hb_000377_140--Hb_009102_020 Hb_000377_140--Hb_144547_010 Hb_023051_010 Hb_023051_010 Hb_000377_140--Hb_023051_010 Hb_000982_150 Hb_000982_150 Hb_000377_140--Hb_000982_150 Hb_004052_160 Hb_004052_160 Hb_000377_140--Hb_004052_160 Hb_047560_010 Hb_047560_010 Hb_144547_010--Hb_047560_010 Hb_144547_010--Hb_009102_020 Hb_000438_150 Hb_000438_150 Hb_144547_010--Hb_000438_150 Hb_143933_010 Hb_143933_010 Hb_144547_010--Hb_143933_010 Hb_000197_170 Hb_000197_170 Hb_144547_010--Hb_000197_170 Hb_002235_270 Hb_002235_270 Hb_009102_020--Hb_002235_270 Hb_009102_020--Hb_000438_150 Hb_003906_030 Hb_003906_030 Hb_009102_020--Hb_003906_030 Hb_035761_010 Hb_035761_010 Hb_009102_020--Hb_035761_010 Hb_005542_100--Hb_000377_140 Hb_001489_140 Hb_001489_140 Hb_005542_100--Hb_001489_140 Hb_036026_010 Hb_036026_010 Hb_005542_100--Hb_036026_010 Hb_001584_180 Hb_001584_180 Hb_005542_100--Hb_001584_180 Hb_129722_010 Hb_129722_010 Hb_005542_100--Hb_129722_010 Hb_003098_010 Hb_003098_010 Hb_001449_060--Hb_003098_010 Hb_005730_130 Hb_005730_130 Hb_001449_060--Hb_005730_130 Hb_001077_020 Hb_001077_020 Hb_001449_060--Hb_001077_020 Hb_076038_010 Hb_076038_010 Hb_001449_060--Hb_076038_010 Hb_000311_030 Hb_000311_030 Hb_001449_060--Hb_000311_030 Hb_002847_020 Hb_002847_020 Hb_001449_060--Hb_002847_020 Hb_000424_080 Hb_000424_080 Hb_001001_050--Hb_000424_080 Hb_001001_050--Hb_002235_270 Hb_004449_230 Hb_004449_230 Hb_001001_050--Hb_004449_230 Hb_004064_030 Hb_004064_030 Hb_001001_050--Hb_004064_030 Hb_000668_090 Hb_000668_090 Hb_001001_050--Hb_000668_090 Hb_000964_100 Hb_000964_100 Hb_001001_050--Hb_000964_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.128355 0.0236242 0.0112033 0.0736748 0 0.0143777
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis