Hb_123954_010

Information

Type -
Description -
Location Contig123954: 2-1585
Sequence    

Annotation

kegg
ID rcu:RCOM_1726160
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012077997.1
description PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
swissprot
ID Q56ZZ7
description Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2
trembl
ID A0A067KL20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13001 PE=3 SV=1
Gene Ontology
ID GO:0005887
description plastidic glucose transporter 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07294: 1-1138
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123954_010 0.0 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
2 Hb_020719_030 0.0964668382 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
3 Hb_002272_180 0.0976198927 - - hypothetical protein JCGZ_23380 [Jatropha curcas]
4 Hb_033834_060 0.0976527609 - - DNA-binding bromodomain-containing family protein [Populus trichocarpa]
5 Hb_003090_080 0.0980727005 transcription factor TF Family: MYB PREDICTED: myb-like protein B [Jatropha curcas]
6 Hb_004450_010 0.0981305367 - - PREDICTED: methyltransferase-like protein 10 [Jatropha curcas]
7 Hb_003656_130 0.0997211197 - - PREDICTED: protein bem46 isoform X2 [Jatropha curcas]
8 Hb_000270_630 0.100922454 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like [Jatropha curcas]
9 Hb_000424_230 0.1017217043 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2-like isoform X2 [Glycine max]
10 Hb_018790_030 0.1019954722 - - PREDICTED: cyclic phosphodiesterase-like [Jatropha curcas]
11 Hb_103012_010 0.1034740179 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
12 Hb_003813_130 0.1052879152 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
13 Hb_000059_150 0.1054207634 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 2 [Theobroma cacao]
14 Hb_001341_120 0.1077389381 - - hypothetical protein B456_001G130300 [Gossypium raimondii]
15 Hb_004030_050 0.1077522511 - - PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
16 Hb_001172_010 0.1078860253 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
17 Hb_001960_020 0.1079568697 - - PREDICTED: mitochondrial arginine transporter BAC2 [Jatropha curcas]
18 Hb_002273_130 0.1081747453 - - PREDICTED: T-complex protein 1 subunit eta [Gossypium raimondii]
19 Hb_001541_090 0.1084347775 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
20 Hb_000538_100 0.1092983123 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_123954_010 Hb_123954_010 Hb_020719_030 Hb_020719_030 Hb_123954_010--Hb_020719_030 Hb_002272_180 Hb_002272_180 Hb_123954_010--Hb_002272_180 Hb_033834_060 Hb_033834_060 Hb_123954_010--Hb_033834_060 Hb_003090_080 Hb_003090_080 Hb_123954_010--Hb_003090_080 Hb_004450_010 Hb_004450_010 Hb_123954_010--Hb_004450_010 Hb_003656_130 Hb_003656_130 Hb_123954_010--Hb_003656_130 Hb_020719_030--Hb_002272_180 Hb_020719_030--Hb_033834_060 Hb_001488_410 Hb_001488_410 Hb_020719_030--Hb_001488_410 Hb_004117_130 Hb_004117_130 Hb_020719_030--Hb_004117_130 Hb_000260_170 Hb_000260_170 Hb_020719_030--Hb_000260_170 Hb_103012_010 Hb_103012_010 Hb_020719_030--Hb_103012_010 Hb_000364_060 Hb_000364_060 Hb_002272_180--Hb_000364_060 Hb_002067_040 Hb_002067_040 Hb_002272_180--Hb_002067_040 Hb_012490_030 Hb_012490_030 Hb_002272_180--Hb_012490_030 Hb_002272_180--Hb_004450_010 Hb_002272_180--Hb_033834_060 Hb_004689_050 Hb_004689_050 Hb_033834_060--Hb_004689_050 Hb_004429_100 Hb_004429_100 Hb_033834_060--Hb_004429_100 Hb_009627_010 Hb_009627_010 Hb_033834_060--Hb_009627_010 Hb_001172_010 Hb_001172_010 Hb_033834_060--Hb_001172_010 Hb_033834_060--Hb_001488_410 Hb_106371_010 Hb_106371_010 Hb_003090_080--Hb_106371_010 Hb_000160_040 Hb_000160_040 Hb_003090_080--Hb_000160_040 Hb_028639_010 Hb_028639_010 Hb_003090_080--Hb_028639_010 Hb_001369_420 Hb_001369_420 Hb_003090_080--Hb_001369_420 Hb_003090_080--Hb_033834_060 Hb_003090_080--Hb_004117_130 Hb_002044_060 Hb_002044_060 Hb_004450_010--Hb_002044_060 Hb_000956_030 Hb_000956_030 Hb_004450_010--Hb_000956_030 Hb_000768_110 Hb_000768_110 Hb_004450_010--Hb_000768_110 Hb_004370_030 Hb_004370_030 Hb_004450_010--Hb_004370_030 Hb_001221_040 Hb_001221_040 Hb_004450_010--Hb_001221_040 Hb_000012_090 Hb_000012_090 Hb_003656_130--Hb_000012_090 Hb_010120_030 Hb_010120_030 Hb_003656_130--Hb_010120_030 Hb_018790_030 Hb_018790_030 Hb_003656_130--Hb_018790_030 Hb_003656_130--Hb_000956_030 Hb_000803_300 Hb_000803_300 Hb_003656_130--Hb_000803_300 Hb_002149_020 Hb_002149_020 Hb_003656_130--Hb_002149_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
35.7034 15.269 16.8454 32.3764 62.9166 64.4474
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
40.0205 17.9061 25.5893 36.0439 8.934

CAGE analysis