Hb_125644_010

Information

Type -
Description -
Location Contig125644: 284-1120
Sequence    

Annotation

kegg
ID pop:POPTR_0011s14430g
description POPTRDRAFT_888988; hypothetical protein
nr
ID XP_012071398.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L2Y9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05022 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_125644_010 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
2 Hb_176979_010 0.1345671695 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
3 Hb_115007_010 0.1376708304 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_007342_020 0.1475697742 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
5 Hb_146023_010 0.1605156306 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_000537_120 0.1651920029 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
7 Hb_064398_010 0.171436189 - - cytochrome P450, putative [Ricinus communis]
8 Hb_001114_220 0.1747903655 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
9 Hb_000483_020 0.1754065174 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
10 Hb_000120_700 0.181782224 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
11 Hb_001442_080 0.1885575658 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
12 Hb_021419_060 0.189277911 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
13 Hb_004592_020 0.1893120888 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
14 Hb_000666_020 0.18972061 - - Major latex protein, putative [Ricinus communis]
15 Hb_002900_020 0.1910734794 - - hypothetical protein POPTR_0008s06270g [Populus trichocarpa]
16 Hb_001047_250 0.1915948036 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
17 Hb_000046_060 0.1945875145 - - sugar transporter, putative [Ricinus communis]
18 Hb_022115_030 0.1949934703 - - PREDICTED: umecyanin-like [Jatropha curcas]
19 Hb_000487_170 0.1960219026 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
20 Hb_002917_010 0.1960881444 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]

Gene co-expression network

sample Hb_125644_010 Hb_125644_010 Hb_176979_010 Hb_176979_010 Hb_125644_010--Hb_176979_010 Hb_115007_010 Hb_115007_010 Hb_125644_010--Hb_115007_010 Hb_007342_020 Hb_007342_020 Hb_125644_010--Hb_007342_020 Hb_146023_010 Hb_146023_010 Hb_125644_010--Hb_146023_010 Hb_000537_120 Hb_000537_120 Hb_125644_010--Hb_000537_120 Hb_064398_010 Hb_064398_010 Hb_125644_010--Hb_064398_010 Hb_176979_010--Hb_146023_010 Hb_064885_050 Hb_064885_050 Hb_176979_010--Hb_064885_050 Hb_002917_010 Hb_002917_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_000939_030 Hb_000939_030 Hb_176979_010--Hb_000939_030 Hb_115007_010--Hb_007342_020 Hb_115007_010--Hb_000537_120 Hb_000120_700 Hb_000120_700 Hb_115007_010--Hb_000120_700 Hb_000483_020 Hb_000483_020 Hb_115007_010--Hb_000483_020 Hb_001114_220 Hb_001114_220 Hb_115007_010--Hb_001114_220 Hb_115007_010--Hb_064398_010 Hb_007342_020--Hb_000537_120 Hb_007342_020--Hb_064398_010 Hb_007342_020--Hb_001114_220 Hb_000487_170 Hb_000487_170 Hb_007342_020--Hb_000487_170 Hb_007342_020--Hb_000483_020 Hb_010712_020 Hb_010712_020 Hb_146023_010--Hb_010712_020 Hb_146023_010--Hb_064398_010 Hb_146023_010--Hb_002917_010 Hb_146023_010--Hb_000939_030 Hb_001047_250 Hb_001047_250 Hb_146023_010--Hb_001047_250 Hb_000537_120--Hb_001114_220 Hb_122025_010 Hb_122025_010 Hb_000537_120--Hb_122025_010 Hb_000563_070 Hb_000563_070 Hb_000537_120--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_000537_120--Hb_000264_250 Hb_002551_010 Hb_002551_010 Hb_000537_120--Hb_002551_010 Hb_004592_020 Hb_004592_020 Hb_000537_120--Hb_004592_020 Hb_064398_010--Hb_010712_020 Hb_001863_290 Hb_001863_290 Hb_064398_010--Hb_001863_290 Hb_064398_010--Hb_001442_080 Hb_064398_010--Hb_000487_170 Hb_001141_170 Hb_001141_170 Hb_064398_010--Hb_001141_170 Hb_107258_010 Hb_107258_010 Hb_064398_010--Hb_107258_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.245805 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0908066 2.04093 0.100806

CAGE analysis