Hb_126112_010

Information

Type -
Description -
Location Contig126112: 148-694
Sequence    

Annotation

kegg
ID rcu:RCOM_0724580
description hypothetical protein
nr
ID XP_012075446.1
description PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KSD0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10714 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126112_010 0.0 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
2 Hb_000523_100 0.1563304045 - - PREDICTED: protein DJ-1 homolog D-like [Populus euphratica]
3 Hb_003061_010 0.1636011731 - - hypothetical protein SORBIDRAFT_01g039870 [Sorghum bicolor]
4 Hb_000025_100 0.1739717613 - - -
5 Hb_156526_010 0.1789421303 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
6 Hb_021888_110 0.1823425255 - - -
7 Hb_003581_010 0.1880053079 - - hypothetical protein VITISV_004687 [Vitis vinifera]
8 Hb_071923_010 0.1943862911 - - -
9 Hb_088065_010 0.1954399611 - - hypothetical protein glysoja_007934 [Glycine soja]
10 Hb_001722_020 0.2045593345 - - -
11 Hb_088774_010 0.2054630125 - - -
12 Hb_005305_060 0.2155764689 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
13 Hb_007765_010 0.2199813526 - - conserved hypothetical protein [Ricinus communis]
14 Hb_027472_030 0.2215823171 - - RNA helicase 36, partial [Manihot esculenta]
15 Hb_144898_010 0.2219195472 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
16 Hb_176117_010 0.2231165744 - - Cold-inducible RNA-binding protein [Morus notabilis]
17 Hb_000003_180 0.2238075297 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000025_060 0.2242665287 - - unknown [Populus trichocarpa]
19 Hb_005965_010 0.2252637068 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
20 Hb_128998_010 0.2262387207 - - PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]

Gene co-expression network

sample Hb_126112_010 Hb_126112_010 Hb_000523_100 Hb_000523_100 Hb_126112_010--Hb_000523_100 Hb_003061_010 Hb_003061_010 Hb_126112_010--Hb_003061_010 Hb_000025_100 Hb_000025_100 Hb_126112_010--Hb_000025_100 Hb_156526_010 Hb_156526_010 Hb_126112_010--Hb_156526_010 Hb_021888_110 Hb_021888_110 Hb_126112_010--Hb_021888_110 Hb_003581_010 Hb_003581_010 Hb_126112_010--Hb_003581_010 Hb_088065_010 Hb_088065_010 Hb_000523_100--Hb_088065_010 Hb_088774_010 Hb_088774_010 Hb_000523_100--Hb_088774_010 Hb_000295_090 Hb_000295_090 Hb_000523_100--Hb_000295_090 Hb_000003_180 Hb_000003_180 Hb_000523_100--Hb_000003_180 Hb_071923_010 Hb_071923_010 Hb_000523_100--Hb_071923_010 Hb_000230_040 Hb_000230_040 Hb_003061_010--Hb_000230_040 Hb_000891_040 Hb_000891_040 Hb_003061_010--Hb_000891_040 Hb_003061_010--Hb_156526_010 Hb_002151_080 Hb_002151_080 Hb_003061_010--Hb_002151_080 Hb_005839_050 Hb_005839_050 Hb_003061_010--Hb_005839_050 Hb_121550_010 Hb_121550_010 Hb_000025_100--Hb_121550_010 Hb_008442_010 Hb_008442_010 Hb_000025_100--Hb_008442_010 Hb_147123_010 Hb_147123_010 Hb_000025_100--Hb_147123_010 Hb_000025_100--Hb_021888_110 Hb_000025_100--Hb_071923_010 Hb_002045_140 Hb_002045_140 Hb_156526_010--Hb_002045_140 Hb_003073_050 Hb_003073_050 Hb_156526_010--Hb_003073_050 Hb_005511_100 Hb_005511_100 Hb_156526_010--Hb_005511_100 Hb_003297_010 Hb_003297_010 Hb_156526_010--Hb_003297_010 Hb_115919_010 Hb_115919_010 Hb_021888_110--Hb_115919_010 Hb_001095_060 Hb_001095_060 Hb_021888_110--Hb_001095_060 Hb_144101_010 Hb_144101_010 Hb_021888_110--Hb_144101_010 Hb_121236_010 Hb_121236_010 Hb_021888_110--Hb_121236_010 Hb_000001_040 Hb_000001_040 Hb_003581_010--Hb_000001_040 Hb_168737_010 Hb_168737_010 Hb_003581_010--Hb_168737_010 Hb_000265_130 Hb_000265_130 Hb_003581_010--Hb_000265_130 Hb_128998_010 Hb_128998_010 Hb_003581_010--Hb_128998_010 Hb_000007_460 Hb_000007_460 Hb_003581_010--Hb_000007_460 Hb_116632_010 Hb_116632_010 Hb_003581_010--Hb_116632_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.74705 0.712028 0.462798 0.688129 0.627287 7.65611
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.33091 1.96009 0 0.22041 0.236709

CAGE analysis