Hb_126466_010

Information

Type -
Description -
Location Contig126466: 2734-3867
Sequence    

Annotation

kegg
ID rcu:RCOM_0366700
description alcohol dehydrogenase, putative (EC:1.1.1.255)
nr
ID XP_002534286.1
description alcohol dehydrogenase, putative [Ricinus communis]
swissprot
ID Q9ZRF1
description Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1
trembl
ID B9T7R7
description Alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_0366700 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126466_010 0.0 - - alcohol dehydrogenase, putative [Ricinus communis]
2 Hb_002272_070 0.0913637111 - - PREDICTED: keratin, type I cytoskeletal 9 [Jatropha curcas]
3 Hb_001823_070 0.0961407543 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
4 Hb_003439_020 0.1068138777 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
5 Hb_000028_460 0.11038178 - - hypothetical protein POPTR_0015s05340g [Populus trichocarpa]
6 Hb_011470_010 0.1104215684 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
7 Hb_002477_080 0.1142717604 - - hypothetical protein RCOM_0653450 [Ricinus communis]
8 Hb_085010_010 0.1157072727 - - PREDICTED: MLO-like protein 3 isoform X2 [Vitis vinifera]
9 Hb_006615_190 0.1190093372 - - UDP-glycosyltransferase 1 [Linum usitatissimum]
10 Hb_002329_030 0.1239859983 - - PREDICTED: pleiotropic drug resistance protein 2-like isoform X1 [Jatropha curcas]
11 Hb_000072_160 0.1273366622 - - proline oxidase [Manihot esculenta]
12 Hb_084127_010 0.1386076678 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_074312_020 0.1388742599 - - cytochrome P450, putative [Ricinus communis]
14 Hb_000994_100 0.1447323839 - - RALFL33, putative [Ricinus communis]
15 Hb_006364_020 0.144805487 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
16 Hb_007237_090 0.148609671 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000899_060 0.1487760827 - - PREDICTED: uncharacterized protein LOC105793631 [Gossypium raimondii]
18 Hb_002970_070 0.1492700125 - - multidrug/pheromone exporter protein [Hevea brasiliensis]
19 Hb_001862_060 0.1497824846 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
20 Hb_014361_130 0.1508445073 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]

Gene co-expression network

sample Hb_126466_010 Hb_126466_010 Hb_002272_070 Hb_002272_070 Hb_126466_010--Hb_002272_070 Hb_001823_070 Hb_001823_070 Hb_126466_010--Hb_001823_070 Hb_003439_020 Hb_003439_020 Hb_126466_010--Hb_003439_020 Hb_000028_460 Hb_000028_460 Hb_126466_010--Hb_000028_460 Hb_011470_010 Hb_011470_010 Hb_126466_010--Hb_011470_010 Hb_002477_080 Hb_002477_080 Hb_126466_010--Hb_002477_080 Hb_002329_030 Hb_002329_030 Hb_002272_070--Hb_002329_030 Hb_000072_160 Hb_000072_160 Hb_002272_070--Hb_000072_160 Hb_002272_070--Hb_011470_010 Hb_006615_190 Hb_006615_190 Hb_002272_070--Hb_006615_190 Hb_145139_010 Hb_145139_010 Hb_002272_070--Hb_145139_010 Hb_006364_020 Hb_006364_020 Hb_001823_070--Hb_006364_020 Hb_000111_190 Hb_000111_190 Hb_001823_070--Hb_000111_190 Hb_001823_070--Hb_002477_080 Hb_000152_250 Hb_000152_250 Hb_001823_070--Hb_000152_250 Hb_130967_010 Hb_130967_010 Hb_001823_070--Hb_130967_010 Hb_074312_020 Hb_074312_020 Hb_003439_020--Hb_074312_020 Hb_134017_010 Hb_134017_010 Hb_003439_020--Hb_134017_010 Hb_001862_060 Hb_001862_060 Hb_003439_020--Hb_001862_060 Hb_000255_020 Hb_000255_020 Hb_003439_020--Hb_000255_020 Hb_003430_020 Hb_003430_020 Hb_003439_020--Hb_003430_020 Hb_084127_010 Hb_084127_010 Hb_003439_020--Hb_084127_010 Hb_000497_100 Hb_000497_100 Hb_000028_460--Hb_000497_100 Hb_008092_020 Hb_008092_020 Hb_000028_460--Hb_008092_020 Hb_038777_010 Hb_038777_010 Hb_000028_460--Hb_038777_010 Hb_005357_020 Hb_005357_020 Hb_000028_460--Hb_005357_020 Hb_002000_130 Hb_002000_130 Hb_000028_460--Hb_002000_130 Hb_012743_020 Hb_012743_020 Hb_000028_460--Hb_012743_020 Hb_085010_010 Hb_085010_010 Hb_011470_010--Hb_085010_010 Hb_011470_010--Hb_000072_160 Hb_011470_010--Hb_002329_030 Hb_014361_130 Hb_014361_130 Hb_011470_010--Hb_014361_130 Hb_000899_060 Hb_000899_060 Hb_002477_080--Hb_000899_060 Hb_002431_090 Hb_002431_090 Hb_002477_080--Hb_002431_090 Hb_000816_050 Hb_000816_050 Hb_002477_080--Hb_000816_050 Hb_103541_010 Hb_103541_010 Hb_002477_080--Hb_103541_010 Hb_002477_080--Hb_000028_460
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.35768 0.107072 0.9197 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.808945 0.492262

CAGE analysis