Hb_126907_010

Information

Type -
Description -
Location Contig126907: 27-1658
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126907_010 0.0 - - -
2 Hb_084611_010 0.0502429368 - - PREDICTED: uncharacterized protein LOC104249812 [Nicotiana sylvestris]
3 Hb_000117_170 0.0505920728 - - PREDICTED: uncharacterized protein LOC104088736 isoform X2 [Nicotiana tomentosiformis]
4 Hb_000281_170 0.088949815 - - polyprotein [Citrus endogenous pararetrovirus]
5 Hb_000849_110 0.0937782009 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
6 Hb_046117_040 0.104919809 - - hypothetical protein JCGZ_07941 [Jatropha curcas]
7 Hb_150998_010 0.1431492897 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
8 Hb_002774_130 0.1485949298 - - -
9 Hb_006216_010 0.1534425367 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]
10 Hb_172632_020 0.2246242391 - - -
11 Hb_057217_010 0.2345392485 - - PREDICTED: uncharacterized protein LOC104594412 [Nelumbo nucifera]
12 Hb_005389_010 0.2390943662 - - hypothetical protein PRUPE_ppa016115mg [Prunus persica]
13 Hb_001250_110 0.2404826733 transcription factor TF Family: HB hypothetical protein POPTR_0010s05340g [Populus trichocarpa]
14 Hb_001218_080 0.2434863092 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
15 Hb_004361_030 0.2457561991 - - PREDICTED: uncharacterized protein LOC104239397 isoform X1 [Nicotiana sylvestris]
16 Hb_000862_020 0.246934004 - - PREDICTED: cytochrome P450 87A3 [Jatropha curcas]
17 Hb_000825_040 0.2510589616 - - catalytic, putative [Ricinus communis]
18 Hb_003851_050 0.2664247782 - - oligopeptide transporter, putative [Ricinus communis]
19 Hb_008453_070 0.2750254673 - - putative aquaporin [Vitis vinifera]
20 Hb_000960_070 0.2777323533 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]

Gene co-expression network

sample Hb_126907_010 Hb_126907_010 Hb_084611_010 Hb_084611_010 Hb_126907_010--Hb_084611_010 Hb_000117_170 Hb_000117_170 Hb_126907_010--Hb_000117_170 Hb_000281_170 Hb_000281_170 Hb_126907_010--Hb_000281_170 Hb_000849_110 Hb_000849_110 Hb_126907_010--Hb_000849_110 Hb_046117_040 Hb_046117_040 Hb_126907_010--Hb_046117_040 Hb_150998_010 Hb_150998_010 Hb_126907_010--Hb_150998_010 Hb_084611_010--Hb_000117_170 Hb_084611_010--Hb_000849_110 Hb_084611_010--Hb_000281_170 Hb_084611_010--Hb_046117_040 Hb_002774_130 Hb_002774_130 Hb_084611_010--Hb_002774_130 Hb_000117_170--Hb_000281_170 Hb_000117_170--Hb_000849_110 Hb_000117_170--Hb_046117_040 Hb_000117_170--Hb_002774_130 Hb_000281_170--Hb_046117_040 Hb_000281_170--Hb_002774_130 Hb_000281_170--Hb_000849_110 Hb_000849_110--Hb_002774_130 Hb_000849_110--Hb_046117_040 Hb_046117_040--Hb_002774_130 Hb_046117_040--Hb_150998_010 Hb_006216_010 Hb_006216_010 Hb_150998_010--Hb_006216_010 Hb_000862_020 Hb_000862_020 Hb_150998_010--Hb_000862_020 Hb_007194_020 Hb_007194_020 Hb_150998_010--Hb_007194_020 Hb_150998_010--Hb_000281_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0597304 0 0 0 0.0157989
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0129413 0

CAGE analysis