Hb_127263_010

Information

Type -
Description -
Location Contig127263: 24-1059
Sequence    

Annotation

kegg
ID sot:102599681
description uncharacterized LOC102599681
nr
ID KDP22644.1
description hypothetical protein JCGZ_02828 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JSZ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02828 PE=4 SV=1
Gene Ontology
ID GO:0016772
description kinase superfamily protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_127263_010 0.0 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
2 Hb_000239_050 0.0423006671 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
3 Hb_001409_080 0.0615613798 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
4 Hb_000300_110 0.0617696237 - - hypothetical protein JCGZ_02651 [Jatropha curcas]
5 Hb_000866_060 0.0625318353 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
6 Hb_000424_130 0.0797359621 - - PREDICTED: monoacylglycerol lipase abhd6-B-like [Jatropha curcas]
7 Hb_029920_010 0.0843799232 - - pepsin A, putative [Ricinus communis]
8 Hb_000152_350 0.0890226365 - - PREDICTED: enolase [Jatropha curcas]
9 Hb_006267_040 0.0923031237 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
10 Hb_000041_210 0.0923980543 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
11 Hb_007545_070 0.0934861606 transcription factor TF Family: MYB PREDICTED: myb-related protein 306 [Populus euphratica]
12 Hb_002391_030 0.0941887239 - - hypothetical protein CISIN_1g020187mg [Citrus sinensis]
13 Hb_156093_010 0.0963703779 - - hypothetical protein RCOM_0504250 [Ricinus communis]
14 Hb_012389_010 0.1002255847 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
15 Hb_067558_010 0.1012235717 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
16 Hb_005018_010 0.1019962283 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
17 Hb_001491_070 0.1060512364 - - PREDICTED: probable beta-1,3-galactosyltransferase 17 isoform X1 [Jatropha curcas]
18 Hb_015044_010 0.106371278 - - hypothetical protein JCGZ_25130 [Jatropha curcas]
19 Hb_137222_010 0.1072525973 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
20 Hb_005535_070 0.1084149276 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_127263_010 Hb_127263_010 Hb_000239_050 Hb_000239_050 Hb_127263_010--Hb_000239_050 Hb_001409_080 Hb_001409_080 Hb_127263_010--Hb_001409_080 Hb_000300_110 Hb_000300_110 Hb_127263_010--Hb_000300_110 Hb_000866_060 Hb_000866_060 Hb_127263_010--Hb_000866_060 Hb_000424_130 Hb_000424_130 Hb_127263_010--Hb_000424_130 Hb_029920_010 Hb_029920_010 Hb_127263_010--Hb_029920_010 Hb_000239_050--Hb_000866_060 Hb_000239_050--Hb_000300_110 Hb_000041_210 Hb_000041_210 Hb_000239_050--Hb_000041_210 Hb_007545_070 Hb_007545_070 Hb_000239_050--Hb_007545_070 Hb_000239_050--Hb_000424_130 Hb_001409_080--Hb_000866_060 Hb_176680_010 Hb_176680_010 Hb_001409_080--Hb_176680_010 Hb_001409_080--Hb_000239_050 Hb_006938_060 Hb_006938_060 Hb_001409_080--Hb_006938_060 Hb_002762_050 Hb_002762_050 Hb_001409_080--Hb_002762_050 Hb_000300_110--Hb_029920_010 Hb_000300_110--Hb_007545_070 Hb_000300_110--Hb_000866_060 Hb_000152_350 Hb_000152_350 Hb_000300_110--Hb_000152_350 Hb_006267_040 Hb_006267_040 Hb_000866_060--Hb_006267_040 Hb_015044_010 Hb_015044_010 Hb_000866_060--Hb_015044_010 Hb_000424_130--Hb_000152_350 Hb_002835_310 Hb_002835_310 Hb_000424_130--Hb_002835_310 Hb_000424_130--Hb_007545_070 Hb_000424_130--Hb_000300_110 Hb_000424_130--Hb_029920_010 Hb_029920_010--Hb_000152_350 Hb_003702_060 Hb_003702_060 Hb_029920_010--Hb_003702_060 Hb_137222_010 Hb_137222_010 Hb_029920_010--Hb_137222_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0219744 0.591183 0.285684 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0793356 0.646232

CAGE analysis