Hb_127552_030

Information

Type -
Description -
Location Contig127552: 36385-39783
Sequence    

Annotation

kegg
ID sot:102604542
description uncharacterized LOC102604542
nr
ID XP_012066659.1
description PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08397: 37928-39441
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_127552_030 0.0 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
2 Hb_155159_030 0.0483125034 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
3 Hb_015934_070 0.0620132506 - - PREDICTED: ribose-phosphate pyrophosphokinase 4 isoform X1 [Jatropha curcas]
4 Hb_025240_040 0.0651697893 - - hypothetical protein JCGZ_02438 [Jatropha curcas]
5 Hb_000976_170 0.069563069 - - PREDICTED: ATPase family AAA domain-containing protein 3-like [Jatropha curcas]
6 Hb_105123_010 0.0716699002 - - PREDICTED: probable protein phosphatase 2C 8 [Jatropha curcas]
7 Hb_108350_010 0.0778481256 - - GTP-binding protein erg, putative [Ricinus communis]
8 Hb_001959_210 0.0797670573 - - PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
9 Hb_001619_070 0.0810907032 - - PREDICTED: uncharacterized protein LOC103503585 [Cucumis melo]
10 Hb_001009_170 0.0825925156 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_000120_460 0.0829260581 - - PREDICTED: thioredoxin reductase NTRB-like [Jatropha curcas]
12 Hb_001545_080 0.083564857 - - PREDICTED: tRNA pseudouridine(38/39) synthase isoform X3 [Jatropha curcas]
13 Hb_001006_190 0.085538368 - - PREDICTED: uncharacterized protein LOC105634201 [Jatropha curcas]
14 Hb_002183_060 0.0857144294 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
15 Hb_000206_210 0.0861875144 - - PREDICTED: G patch domain-containing protein 11 [Jatropha curcas]
16 Hb_004218_110 0.0866929523 - - hypothetical protein PRUPE_ppa006329mg [Prunus persica]
17 Hb_024185_020 0.0869949405 - - -
18 Hb_004254_120 0.0874217722 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005183_120 0.0877372493 - - protein translocase, putative [Ricinus communis]
20 Hb_002183_090 0.0878795785 - - PREDICTED: protein EMSY-LIKE 1 [Jatropha curcas]

Gene co-expression network

sample Hb_127552_030 Hb_127552_030 Hb_155159_030 Hb_155159_030 Hb_127552_030--Hb_155159_030 Hb_015934_070 Hb_015934_070 Hb_127552_030--Hb_015934_070 Hb_025240_040 Hb_025240_040 Hb_127552_030--Hb_025240_040 Hb_000976_170 Hb_000976_170 Hb_127552_030--Hb_000976_170 Hb_105123_010 Hb_105123_010 Hb_127552_030--Hb_105123_010 Hb_108350_010 Hb_108350_010 Hb_127552_030--Hb_108350_010 Hb_155159_030--Hb_105123_010 Hb_155159_030--Hb_015934_070 Hb_032258_030 Hb_032258_030 Hb_155159_030--Hb_032258_030 Hb_155159_030--Hb_025240_040 Hb_001579_220 Hb_001579_220 Hb_155159_030--Hb_001579_220 Hb_031862_100 Hb_031862_100 Hb_015934_070--Hb_031862_100 Hb_015934_070--Hb_025240_040 Hb_006907_130 Hb_006907_130 Hb_015934_070--Hb_006907_130 Hb_007017_030 Hb_007017_030 Hb_015934_070--Hb_007017_030 Hb_001369_690 Hb_001369_690 Hb_015934_070--Hb_001369_690 Hb_004218_110 Hb_004218_110 Hb_025240_040--Hb_004218_110 Hb_004254_120 Hb_004254_120 Hb_025240_040--Hb_004254_120 Hb_002759_060 Hb_002759_060 Hb_025240_040--Hb_002759_060 Hb_000421_220 Hb_000421_220 Hb_025240_040--Hb_000421_220 Hb_000120_460 Hb_000120_460 Hb_000976_170--Hb_000120_460 Hb_000976_170--Hb_108350_010 Hb_002183_090 Hb_002183_090 Hb_000976_170--Hb_002183_090 Hb_000085_050 Hb_000085_050 Hb_000976_170--Hb_000085_050 Hb_000976_170--Hb_025240_040 Hb_012098_080 Hb_012098_080 Hb_105123_010--Hb_012098_080 Hb_105123_010--Hb_032258_030 Hb_000861_020 Hb_000861_020 Hb_105123_010--Hb_000861_020 Hb_022693_060 Hb_022693_060 Hb_105123_010--Hb_022693_060 Hb_108350_010--Hb_000085_050 Hb_108350_010--Hb_000120_460 Hb_108350_010--Hb_002183_090 Hb_058999_020 Hb_058999_020 Hb_108350_010--Hb_058999_020 Hb_000092_170 Hb_000092_170 Hb_108350_010--Hb_000092_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.27458 1.21085 1.70504 2.02093 3.0452 4.28349
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.6346 5.63882 4.73294 4.61079 3.60796

CAGE analysis