Hb_128998_010

Information

Type -
Description -
Location Contig128998: 320-508
Sequence    

Annotation

kegg
ID tcc:TCM_043166
description Kinesin like protein
nr
ID XP_012093271.1
description PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJC4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20059 PE=4 SV=1
Gene Ontology
ID GO:0031966
description kinesin like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128998_010 0.0 - - PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas]
2 Hb_112047_010 0.1203367257 - - -
3 Hb_010504_030 0.1211956585 - - calmodulin homolog {EST} [Brassica napus, Naehan, root, Peptide Partial, 53 aa]
4 Hb_006663_090 0.1340166969 - - hypothetical protein B456_010G1255001, partial [Gossypium raimondii]
5 Hb_000429_250 0.1352640795 - - hypothetical protein L484_000744 [Morus notabilis]
6 Hb_000007_460 0.1367569496 - - PREDICTED: uncharacterized protein LOC105641948 [Jatropha curcas]
7 Hb_001767_120 0.1382900166 - - -
8 Hb_003581_010 0.1414554018 - - hypothetical protein VITISV_004687 [Vitis vinifera]
9 Hb_000176_120 0.1421169553 - - seryl-tRNA synthetase, putative [Ricinus communis]
10 Hb_005714_130 0.1427042144 transcription factor TF Family: C2H2 unknown [Populus trichocarpa x Populus deltoides]
11 Hb_007188_020 0.1448284642 - - hypothetical protein PRUPE_ppb010436mg [Prunus persica]
12 Hb_001623_290 0.1464588947 - - unknown [Populus trichocarpa]
13 Hb_136731_010 0.1477785032 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
14 Hb_001623_300 0.14796254 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Jatropha curcas]
15 Hb_000327_290 0.1494970261 - - Histone H4 [Triticum urartu]
16 Hb_002084_010 0.1498949032 - - hypothetical protein VITISV_017990 [Vitis vinifera]
17 Hb_076875_020 0.1561844625 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
18 Hb_010565_010 0.1569511976 - - PREDICTED: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like isoform X2 [Populus euphratica]
19 Hb_106005_010 0.1582435065 - - EG5651 [Manihot esculenta]
20 Hb_003371_170 0.159440687 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_128998_010 Hb_128998_010 Hb_112047_010 Hb_112047_010 Hb_128998_010--Hb_112047_010 Hb_010504_030 Hb_010504_030 Hb_128998_010--Hb_010504_030 Hb_006663_090 Hb_006663_090 Hb_128998_010--Hb_006663_090 Hb_000429_250 Hb_000429_250 Hb_128998_010--Hb_000429_250 Hb_000007_460 Hb_000007_460 Hb_128998_010--Hb_000007_460 Hb_001767_120 Hb_001767_120 Hb_128998_010--Hb_001767_120 Hb_112047_010--Hb_000429_250 Hb_001623_290 Hb_001623_290 Hb_112047_010--Hb_001623_290 Hb_001623_300 Hb_001623_300 Hb_112047_010--Hb_001623_300 Hb_000327_290 Hb_000327_290 Hb_112047_010--Hb_000327_290 Hb_000136_180 Hb_000136_180 Hb_112047_010--Hb_000136_180 Hb_000176_120 Hb_000176_120 Hb_010504_030--Hb_000176_120 Hb_010504_030--Hb_000327_290 Hb_000001_040 Hb_000001_040 Hb_010504_030--Hb_000001_040 Hb_000265_130 Hb_000265_130 Hb_010504_030--Hb_000265_130 Hb_010504_030--Hb_000007_460 Hb_000825_030 Hb_000825_030 Hb_006663_090--Hb_000825_030 Hb_001386_140 Hb_001386_140 Hb_006663_090--Hb_001386_140 Hb_115477_010 Hb_115477_010 Hb_006663_090--Hb_115477_010 Hb_068014_010 Hb_068014_010 Hb_006663_090--Hb_068014_010 Hb_006487_060 Hb_006487_060 Hb_006663_090--Hb_006487_060 Hb_005679_070 Hb_005679_070 Hb_006663_090--Hb_005679_070 Hb_000429_250--Hb_001623_300 Hb_000429_250--Hb_001623_290 Hb_142751_010 Hb_142751_010 Hb_000429_250--Hb_142751_010 Hb_000429_250--Hb_001767_120 Hb_007188_020 Hb_007188_020 Hb_000007_460--Hb_007188_020 Hb_003581_010 Hb_003581_010 Hb_000007_460--Hb_003581_010 Hb_013691_030 Hb_013691_030 Hb_000007_460--Hb_013691_030 Hb_000015_070 Hb_000015_070 Hb_000007_460--Hb_000015_070 Hb_005714_130 Hb_005714_130 Hb_001767_120--Hb_005714_130 Hb_001752_040 Hb_001752_040 Hb_001767_120--Hb_001752_040 Hb_002508_010 Hb_002508_010 Hb_001767_120--Hb_002508_010 Hb_121467_010 Hb_121467_010 Hb_001767_120--Hb_121467_010 Hb_171788_010 Hb_171788_010 Hb_001767_120--Hb_171788_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
124.328 132.564 79.8665 292.435 137.527 867.472
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
150.359 210.924 72.9233 66.9593 29.8835

CAGE analysis