Hb_129067_010

Information

Type -
Description -
Location Contig129067: 3684-7109
Sequence    

Annotation

kegg
ID tcc:TCM_012311
description Cytochrome P450 superfamily protein
nr
ID XP_007036492.1
description Cytochrome P450 superfamily protein [Theobroma cacao]
swissprot
ID H2DH18
description Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1
trembl
ID A0A061FV72
description Cytochrome P450 superfamily protein OS=Theobroma cacao GN=TCM_012311 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 cyp736a12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_129067_010 0.0 - - Cytochrome P450 superfamily protein [Theobroma cacao]
2 Hb_088542_010 0.1504705629 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
3 Hb_001632_010 0.1667949085 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
4 Hb_000733_040 0.1701946895 - - hypothetical protein POPTR_0010s20310g [Populus trichocarpa]
5 Hb_073212_010 0.1749633235 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
6 Hb_095471_010 0.1904839337 - - PREDICTED: putative sodium-coupled neutral amino acid transporter 7 [Jatropha curcas]
7 Hb_012384_050 0.1921974482 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
8 Hb_001691_050 0.2098059243 - - -
9 Hb_002843_050 0.2098768289 - - scab resistance family protein [Populus trichocarpa]
10 Hb_002735_040 0.2270468047 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
11 Hb_105085_010 0.2302625963 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
12 Hb_000815_100 0.2344685434 - - -
13 Hb_000313_320 0.2425862571 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
14 Hb_000605_010 0.2434894609 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
15 Hb_040506_010 0.246766782 - - protein binding protein, putative [Ricinus communis]
16 Hb_001677_050 0.247499503 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
17 Hb_000465_120 0.2488847242 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
18 Hb_008707_030 0.249368806 - - PREDICTED: uncharacterized protein LOC104447982 [Eucalyptus grandis]
19 Hb_000590_080 0.2539719589 - - PREDICTED: metal tolerance protein 11 [Jatropha curcas]
20 Hb_000329_050 0.2572492783 - - -

Gene co-expression network

sample Hb_129067_010 Hb_129067_010 Hb_088542_010 Hb_088542_010 Hb_129067_010--Hb_088542_010 Hb_001632_010 Hb_001632_010 Hb_129067_010--Hb_001632_010 Hb_000733_040 Hb_000733_040 Hb_129067_010--Hb_000733_040 Hb_073212_010 Hb_073212_010 Hb_129067_010--Hb_073212_010 Hb_095471_010 Hb_095471_010 Hb_129067_010--Hb_095471_010 Hb_012384_050 Hb_012384_050 Hb_129067_010--Hb_012384_050 Hb_088542_010--Hb_001632_010 Hb_088542_010--Hb_073212_010 Hb_001677_050 Hb_001677_050 Hb_088542_010--Hb_001677_050 Hb_000605_010 Hb_000605_010 Hb_088542_010--Hb_000605_010 Hb_088542_010--Hb_000733_040 Hb_001632_010--Hb_001677_050 Hb_001632_010--Hb_073212_010 Hb_001632_010--Hb_000605_010 Hb_001632_010--Hb_012384_050 Hb_089140_060 Hb_089140_060 Hb_000733_040--Hb_089140_060 Hb_000733_040--Hb_073212_010 Hb_040506_010 Hb_040506_010 Hb_000733_040--Hb_040506_010 Hb_001691_050 Hb_001691_050 Hb_000733_040--Hb_001691_050 Hb_004007_150 Hb_004007_150 Hb_073212_010--Hb_004007_150 Hb_073212_010--Hb_000605_010 Hb_073212_010--Hb_012384_050 Hb_073212_010--Hb_001691_050 Hb_000313_320 Hb_000313_320 Hb_095471_010--Hb_000313_320 Hb_000365_260 Hb_000365_260 Hb_095471_010--Hb_000365_260 Hb_000465_120 Hb_000465_120 Hb_095471_010--Hb_000465_120 Hb_000815_100 Hb_000815_100 Hb_095471_010--Hb_000815_100 Hb_032264_130 Hb_032264_130 Hb_095471_010--Hb_032264_130 Hb_012384_050--Hb_000365_260 Hb_006615_100 Hb_006615_100 Hb_012384_050--Hb_006615_100 Hb_003064_030 Hb_003064_030 Hb_012384_050--Hb_003064_030 Hb_000815_140 Hb_000815_140 Hb_012384_050--Hb_000815_140 Hb_087221_010 Hb_087221_010 Hb_012384_050--Hb_087221_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.4098 1.72563 0.778319 0.581807 5.44044 6.20078
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.151088 0.277271 3.93832 3.77473 0.891677

CAGE analysis