Hb_129204_020

Information

Type -
Description -
Location Contig129204: 12490-16986
Sequence    

Annotation

kegg
ID pmum:103340780
description IAA-amino acid hydrolase ILR1-like 4
nr
ID XP_012076816.1
description PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
swissprot
ID O04373
description IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2
trembl
ID A0A067KNB7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07331 PE=4 SV=1
Gene Ontology
ID GO:0016787
description iaa-amino acid hydrolase ilr1-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08810: 12961-16071 , PASA_asmbl_08812: 12961-20210 , PASA_asmbl_08813: 15709-15981 , PASA_asmbl_08814: 16336-16519
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_129204_020 0.0 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
2 Hb_052135_020 0.1006657995 - - PREDICTED: MAP kinase kinase MKK1/SSP32-like [Jatropha curcas]
3 Hb_001221_580 0.118064363 - - PREDICTED: recQ-mediated genome instability protein 1 [Jatropha curcas]
4 Hb_004837_220 0.1232250619 - - PREDICTED: sulfite reductase [ferredoxin], chloroplastic [Jatropha curcas]
5 Hb_002317_010 0.1238002665 - - PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Jatropha curcas]
6 Hb_002107_100 0.1241474208 - - PREDICTED: la-related protein 1C-like isoform X3 [Jatropha curcas]
7 Hb_158445_020 0.1248129733 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000567_090 0.1254042012 - - PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Jatropha curcas]
9 Hb_005903_020 0.1301923017 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
10 Hb_000890_160 0.1303147566 - - PREDICTED: anaphase-promoting complex subunit 7 [Jatropha curcas]
11 Hb_001396_010 0.1320034013 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
12 Hb_000297_030 0.132186567 - - PREDICTED: mitogen-activated protein kinase kinase 2 isoform X1 [Jatropha curcas]
13 Hb_000866_140 0.1333173151 - - Rop guanine nucleotide exchange factor, putative [Ricinus communis]
14 Hb_000029_170 0.1340175467 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
15 Hb_001195_220 0.1353358649 - - sugar transporter, putative [Ricinus communis]
16 Hb_008725_050 0.1362108603 - - syntaxin, putative [Ricinus communis]
17 Hb_024758_020 0.1382064915 - - acyl-CoA binding protein 3B [Vernicia fordii]
18 Hb_003428_090 0.1430944104 - - PREDICTED: DNA (cytosine-5)-methyltransferase DRM2 [Jatropha curcas]
19 Hb_001369_470 0.1432494129 - - PREDICTED: monocopper oxidase-like protein SKS1 [Jatropha curcas]
20 Hb_016734_020 0.1436816489 - - sugar transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_129204_020 Hb_129204_020 Hb_052135_020 Hb_052135_020 Hb_129204_020--Hb_052135_020 Hb_001221_580 Hb_001221_580 Hb_129204_020--Hb_001221_580 Hb_004837_220 Hb_004837_220 Hb_129204_020--Hb_004837_220 Hb_002317_010 Hb_002317_010 Hb_129204_020--Hb_002317_010 Hb_002107_100 Hb_002107_100 Hb_129204_020--Hb_002107_100 Hb_158445_020 Hb_158445_020 Hb_129204_020--Hb_158445_020 Hb_052135_020--Hb_002317_010 Hb_000567_090 Hb_000567_090 Hb_052135_020--Hb_000567_090 Hb_010068_070 Hb_010068_070 Hb_052135_020--Hb_010068_070 Hb_024758_020 Hb_024758_020 Hb_052135_020--Hb_024758_020 Hb_005833_030 Hb_005833_030 Hb_052135_020--Hb_005833_030 Hb_004108_210 Hb_004108_210 Hb_001221_580--Hb_004108_210 Hb_000098_150 Hb_000098_150 Hb_001221_580--Hb_000098_150 Hb_000890_160 Hb_000890_160 Hb_001221_580--Hb_000890_160 Hb_001221_580--Hb_000567_090 Hb_003428_090 Hb_003428_090 Hb_001221_580--Hb_003428_090 Hb_005903_020 Hb_005903_020 Hb_001221_580--Hb_005903_020 Hb_163968_010 Hb_163968_010 Hb_004837_220--Hb_163968_010 Hb_005000_140 Hb_005000_140 Hb_004837_220--Hb_005000_140 Hb_010368_080 Hb_010368_080 Hb_004837_220--Hb_010368_080 Hb_004267_060 Hb_004267_060 Hb_004837_220--Hb_004267_060 Hb_001085_300 Hb_001085_300 Hb_004837_220--Hb_001085_300 Hb_000000_340 Hb_000000_340 Hb_004837_220--Hb_000000_340 Hb_027760_060 Hb_027760_060 Hb_002317_010--Hb_027760_060 Hb_000029_170 Hb_000029_170 Hb_002317_010--Hb_000029_170 Hb_002687_180 Hb_002687_180 Hb_002317_010--Hb_002687_180 Hb_000101_390 Hb_000101_390 Hb_002317_010--Hb_000101_390 Hb_000260_400 Hb_000260_400 Hb_002317_010--Hb_000260_400 Hb_000796_120 Hb_000796_120 Hb_002107_100--Hb_000796_120 Hb_000270_700 Hb_000270_700 Hb_002107_100--Hb_000270_700 Hb_000418_050 Hb_000418_050 Hb_002107_100--Hb_000418_050 Hb_104920_010 Hb_104920_010 Hb_002107_100--Hb_104920_010 Hb_000034_110 Hb_000034_110 Hb_002107_100--Hb_000034_110 Hb_002107_100--Hb_003428_090 Hb_008054_040 Hb_008054_040 Hb_158445_020--Hb_008054_040 Hb_001396_010 Hb_001396_010 Hb_158445_020--Hb_001396_010 Hb_000229_050 Hb_000229_050 Hb_158445_020--Hb_000229_050 Hb_003839_010 Hb_003839_010 Hb_158445_020--Hb_003839_010 Hb_016734_020 Hb_016734_020 Hb_158445_020--Hb_016734_020 Hb_158445_020--Hb_002107_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.683636 4.31395 8.25817 3.73348 1.94185 1.87742
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.911511 1.0666 1.77696 5.079 1.90253

CAGE analysis