Hb_130357_010

Information

Type -
Description -
Location Contig130357: 18-392
Sequence    

Annotation

kegg
ID rcu:RCOM_0592550
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_012091048.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID Q9SD62
description Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1
trembl
ID A0A067LC70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01308 PE=4 SV=1
Gene Ontology
ID GO:0016021
description lrr receptor-like serine threonine-protein kinase efr

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130357_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_003729_040 0.004223651 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_069237_010 0.0100897587 - - -
4 Hb_001347_020 0.0106019405 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
5 Hb_000422_100 0.0118739845 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
6 Hb_111442_010 0.0147137734 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
7 Hb_000628_090 0.0202071264 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
8 Hb_054865_110 0.0214695684 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000194_040 0.0219369674 - - carbonic anhydrase, putative [Ricinus communis]
10 Hb_000258_010 0.0224023707 - - lipid transfer precursor protein [Hevea brasiliensis]
11 Hb_005976_030 0.027444305 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
12 Hb_002601_030 0.0392949049 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
13 Hb_001892_040 0.0402523883 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
14 Hb_118730_050 0.0422982965 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]
15 Hb_002783_290 0.0424279719 - - Uncharacterized protein TCM_034216 [Theobroma cacao]
16 Hb_001591_020 0.045366907 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
17 Hb_178734_010 0.0453914137 - - PREDICTED: uncharacterized protein LOC103331175 [Prunus mume]
18 Hb_000389_120 0.0459635225 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
19 Hb_049573_010 0.0493640324 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000733_170 0.0511847611 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_130357_010 Hb_130357_010 Hb_003729_040 Hb_003729_040 Hb_130357_010--Hb_003729_040 Hb_069237_010 Hb_069237_010 Hb_130357_010--Hb_069237_010 Hb_001347_020 Hb_001347_020 Hb_130357_010--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_130357_010--Hb_000422_100 Hb_111442_010 Hb_111442_010 Hb_130357_010--Hb_111442_010 Hb_000628_090 Hb_000628_090 Hb_130357_010--Hb_000628_090 Hb_003729_040--Hb_069237_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_000258_010 Hb_000258_010 Hb_003729_040--Hb_000258_010 Hb_003729_040--Hb_111442_010 Hb_069237_010--Hb_000258_010 Hb_005976_030 Hb_005976_030 Hb_069237_010--Hb_005976_030 Hb_069237_010--Hb_001347_020 Hb_069237_010--Hb_000422_100 Hb_001347_020--Hb_000422_100 Hb_001347_020--Hb_111442_010 Hb_001347_020--Hb_000628_090 Hb_054865_110 Hb_054865_110 Hb_001347_020--Hb_054865_110 Hb_000194_040 Hb_000194_040 Hb_001347_020--Hb_000194_040 Hb_000422_100--Hb_111442_010 Hb_000422_100--Hb_000628_090 Hb_000422_100--Hb_054865_110 Hb_000422_100--Hb_000194_040 Hb_111442_010--Hb_000628_090 Hb_111442_010--Hb_054865_110 Hb_111442_010--Hb_000194_040 Hb_000628_090--Hb_054865_110 Hb_000628_090--Hb_000194_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.244604 5.34889 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis