Hb_130739_010

Information

Type -
Description -
Location Contig130739: 518-850
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_130739_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_143933_010 0.1083273729 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_071079_060 0.1139667778 - - PREDICTED: uncharacterized protein LOC105113464 [Populus euphratica]
4 Hb_002965_180 0.137188172 - - AMSH-like ubiquitin thioesterase 3 [Morus notabilis]
5 Hb_020805_160 0.1442556277 - - -
6 Hb_002659_110 0.1484589038 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_158349_010 0.158230221 - - plastid CUL1 [Hevea brasiliensis]
8 Hb_004204_040 0.180783225 - - -
9 Hb_005001_010 0.1998824209 - - GAST1 protein precursor, putative [Ricinus communis]
10 Hb_008196_010 0.205751004 - - unnamed protein product [Coffea canephora]
11 Hb_000352_020 0.2068032882 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
12 Hb_005428_010 0.2076005857 - - cytochrome P450, putative [Ricinus communis]
13 Hb_009838_030 0.2110928443 - - Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
14 Hb_003073_060 0.2112526935 - - -
15 Hb_009851_040 0.2153432168 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002014_120 0.2176344352 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
17 Hb_002597_030 0.2186142748 - - -
18 Hb_179367_010 0.2187069177 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
19 Hb_001948_100 0.2196462587 - - conserved hypothetical protein [Ricinus communis]
20 Hb_045786_010 0.2204541623 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]

Gene co-expression network

sample Hb_130739_010 Hb_130739_010 Hb_143933_010 Hb_143933_010 Hb_130739_010--Hb_143933_010 Hb_071079_060 Hb_071079_060 Hb_130739_010--Hb_071079_060 Hb_002965_180 Hb_002965_180 Hb_130739_010--Hb_002965_180 Hb_020805_160 Hb_020805_160 Hb_130739_010--Hb_020805_160 Hb_002659_110 Hb_002659_110 Hb_130739_010--Hb_002659_110 Hb_158349_010 Hb_158349_010 Hb_130739_010--Hb_158349_010 Hb_143933_010--Hb_158349_010 Hb_143933_010--Hb_020805_160 Hb_143933_010--Hb_002965_180 Hb_143933_010--Hb_071079_060 Hb_047560_010 Hb_047560_010 Hb_143933_010--Hb_047560_010 Hb_004204_040 Hb_004204_040 Hb_071079_060--Hb_004204_040 Hb_001810_050 Hb_001810_050 Hb_071079_060--Hb_001810_050 Hb_012640_010 Hb_012640_010 Hb_071079_060--Hb_012640_010 Hb_071079_060--Hb_020805_160 Hb_071079_060--Hb_002659_110 Hb_002965_180--Hb_158349_010 Hb_002965_180--Hb_002659_110 Hb_002965_180--Hb_071079_060 Hb_053073_010 Hb_053073_010 Hb_002965_180--Hb_053073_010 Hb_119600_020 Hb_119600_020 Hb_020805_160--Hb_119600_020 Hb_005001_010 Hb_005001_010 Hb_020805_160--Hb_005001_010 Hb_009851_040 Hb_009851_040 Hb_020805_160--Hb_009851_040 Hb_002659_110--Hb_004204_040 Hb_087314_010 Hb_087314_010 Hb_002659_110--Hb_087314_010 Hb_048987_020 Hb_048987_020 Hb_002659_110--Hb_048987_020 Hb_113676_010 Hb_113676_010 Hb_158349_010--Hb_113676_010 Hb_091336_010 Hb_091336_010 Hb_158349_010--Hb_091336_010 Hb_101370_010 Hb_101370_010 Hb_158349_010--Hb_101370_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.244573 0.492068 0.513502 1.74773 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis