Hb_131621_010

Information

Type -
Description -
Location Contig131621: 740-2079
Sequence    

Annotation

kegg
ID pop:POPTR_1157s00200g
description hypothetical protein
nr
ID EYU40677.1
description hypothetical protein MIMGU_mgv1a004274mg [Erythranthe guttata]
swissprot
ID Q9ASS4
description Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1
trembl
ID A0A022RJQ9
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a004274mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131621_010 0.0 - - hypothetical protein MIMGU_mgv1a004274mg [Erythranthe guttata]
2 Hb_007765_090 0.0246718982 - - unknown [Glycine max]
3 Hb_043999_010 0.0265451702 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
4 Hb_001486_110 0.0486566909 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
5 Hb_001105_060 0.0702643482 - - hypothetical protein CISIN_1g0045352mg, partial [Citrus sinensis]
6 Hb_000809_150 0.0726970919 - - -
7 Hb_000252_230 0.0997166451 - - hypothetical protein B456_008G160800 [Gossypium raimondii]
8 Hb_004021_110 0.1247205773 - - -
9 Hb_000705_310 0.1897200911 - - hypothetical protein POPTR_0001s03390g [Populus trichocarpa]
10 Hb_001631_120 0.1907185115 - - unnamed protein product [Vitis vinifera]
11 Hb_002540_040 0.1912914213 - - BnaC05g39550D [Brassica napus]
12 Hb_000105_090 0.191952511 - - -
13 Hb_002805_080 0.193686797 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
14 Hb_003384_050 0.1995017365 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_000089_230 0.2005708162 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
16 Hb_000290_010 0.215326825 - - -
17 Hb_002307_060 0.2182467377 - - -
18 Hb_011781_050 0.2313168047 - - -
19 Hb_001032_040 0.2498004517 - - PREDICTED: psbP-like protein 1, chloroplastic [Jatropha curcas]
20 Hb_003494_250 0.2703983778 - - -

Gene co-expression network

sample Hb_131621_010 Hb_131621_010 Hb_007765_090 Hb_007765_090 Hb_131621_010--Hb_007765_090 Hb_043999_010 Hb_043999_010 Hb_131621_010--Hb_043999_010 Hb_001486_110 Hb_001486_110 Hb_131621_010--Hb_001486_110 Hb_001105_060 Hb_001105_060 Hb_131621_010--Hb_001105_060 Hb_000809_150 Hb_000809_150 Hb_131621_010--Hb_000809_150 Hb_000252_230 Hb_000252_230 Hb_131621_010--Hb_000252_230 Hb_007765_090--Hb_043999_010 Hb_007765_090--Hb_001105_060 Hb_007765_090--Hb_000809_150 Hb_007765_090--Hb_001486_110 Hb_007765_090--Hb_000252_230 Hb_043999_010--Hb_001105_060 Hb_043999_010--Hb_000809_150 Hb_043999_010--Hb_000252_230 Hb_043999_010--Hb_001486_110 Hb_004021_110 Hb_004021_110 Hb_001486_110--Hb_004021_110 Hb_001486_110--Hb_001105_060 Hb_001486_110--Hb_000809_150 Hb_001105_060--Hb_000809_150 Hb_001105_060--Hb_000252_230 Hb_000809_150--Hb_000252_230 Hb_000252_230--Hb_001486_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0186166 0 0 0.0566679
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis