Hb_131864_020

Information

Type -
Description -
Location Contig131864: 22548-24524
Sequence    

Annotation

kegg
ID pop:POPTR_0004s03030g
description POPTRDRAFT_831060; Leucoanthocyanidin reductase family protein
nr
ID XP_012091433.1
description PREDICTED: anthocyanidin reductase [Jatropha curcas]
swissprot
ID Q9SEV0
description Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2
trembl
ID A0A067JAN5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21298 PE=4 SV=1
Gene Ontology
ID GO:0033729
description anthocyanidin reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09242: 22388-24516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131864_020 0.0 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
2 Hb_025469_040 0.069487551 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
3 Hb_001473_100 0.093497338 - - chalcone synthase 1 [Jatropha curcas]
4 Hb_007044_070 0.0967688846 - - PREDICTED: tetraketide alpha-pyrone reductase 1-like [Jatropha curcas]
5 Hb_000631_130 0.1090171597 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
6 Hb_000815_280 0.115200798 - - PREDICTED: phosphate transporter PHO1 homolog 3 [Jatropha curcas]
7 Hb_000589_100 0.1179014716 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
8 Hb_000625_130 0.1220774672 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
9 Hb_001691_060 0.1228154414 - - lipoxygenase, putative [Ricinus communis]
10 Hb_001268_330 0.122934762 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
11 Hb_148914_010 0.125229684 - - glutathione s-transferase, putative [Ricinus communis]
12 Hb_142522_030 0.1265484025 - - hypothetical protein JCGZ_21596 [Jatropha curcas]
13 Hb_000556_140 0.1285630598 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 9 [Jatropha curcas]
14 Hb_001936_030 0.1288664696 - - PREDICTED: polygalacturonase At1g48100 isoform X1 [Jatropha curcas]
15 Hb_000917_330 0.1334377174 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
16 Hb_000245_140 0.1378703803 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
17 Hb_011145_020 0.138730124 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
18 Hb_002749_070 0.1392305176 - - PREDICTED: uncharacterized protein LOC105635941 [Jatropha curcas]
19 Hb_012796_050 0.139631223 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
20 Hb_111985_160 0.1397104878 - - hypothetical protein B456_010G008900 [Gossypium raimondii]

Gene co-expression network

sample Hb_131864_020 Hb_131864_020 Hb_025469_040 Hb_025469_040 Hb_131864_020--Hb_025469_040 Hb_001473_100 Hb_001473_100 Hb_131864_020--Hb_001473_100 Hb_007044_070 Hb_007044_070 Hb_131864_020--Hb_007044_070 Hb_000631_130 Hb_000631_130 Hb_131864_020--Hb_000631_130 Hb_000815_280 Hb_000815_280 Hb_131864_020--Hb_000815_280 Hb_000589_100 Hb_000589_100 Hb_131864_020--Hb_000589_100 Hb_025469_040--Hb_001473_100 Hb_025469_040--Hb_000631_130 Hb_025469_040--Hb_007044_070 Hb_000625_130 Hb_000625_130 Hb_025469_040--Hb_000625_130 Hb_148914_010 Hb_148914_010 Hb_025469_040--Hb_148914_010 Hb_001473_100--Hb_000631_130 Hb_004055_080 Hb_004055_080 Hb_001473_100--Hb_004055_080 Hb_000038_090 Hb_000038_090 Hb_001473_100--Hb_000038_090 Hb_001473_100--Hb_007044_070 Hb_007044_070--Hb_000631_130 Hb_001936_030 Hb_001936_030 Hb_007044_070--Hb_001936_030 Hb_142522_030 Hb_142522_030 Hb_007044_070--Hb_142522_030 Hb_000631_130--Hb_000038_090 Hb_000933_200 Hb_000933_200 Hb_000631_130--Hb_000933_200 Hb_000815_280--Hb_000625_130 Hb_000815_280--Hb_025469_040 Hb_000029_420 Hb_000029_420 Hb_000815_280--Hb_000029_420 Hb_000194_080 Hb_000194_080 Hb_000815_280--Hb_000194_080 Hb_111985_160 Hb_111985_160 Hb_000815_280--Hb_111985_160 Hb_000005_350 Hb_000005_350 Hb_000589_100--Hb_000005_350 Hb_011861_020 Hb_011861_020 Hb_000589_100--Hb_011861_020 Hb_000723_240 Hb_000723_240 Hb_000589_100--Hb_000723_240 Hb_028927_010 Hb_028927_010 Hb_000589_100--Hb_028927_010 Hb_000025_740 Hb_000025_740 Hb_000589_100--Hb_000025_740 Hb_001691_060 Hb_001691_060 Hb_000589_100--Hb_001691_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24584 35.2681 75.6544 46.6681 0.626618 2.57818
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.3446 1.30829 2.13476 410.246 10.2578

CAGE analysis