Hb_132438_010

Information

Type -
Description -
Location Contig132438: 67-414
Sequence    

Annotation

kegg
ID bvg:104903465
description uncharacterized LOC104903465
nr
ID XP_010521027.1
description PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
swissprot
ID -
description -
trembl
ID G7LEA2
description Uncharacterized protein OS=Medicago truncatula GN=MTR_8g107770 PE=4 SV=2
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132438_010 0.0 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
2 Hb_000751_210 0.0185000482 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
3 Hb_009543_040 0.0254492868 - - -
4 Hb_017866_010 0.0472027036 - - kinase family protein [Populus trichocarpa]
5 Hb_001157_130 0.0537687525 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
6 Hb_105446_010 0.0563118583 - - -
7 Hb_000575_010 0.0674970376 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
8 Hb_112011_010 0.0703611771 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
9 Hb_000616_060 0.0708350755 - - -
10 Hb_000891_060 0.0756154736 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
11 Hb_002282_030 0.0835253315 - - -
12 Hb_060272_010 0.0871603189 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
13 Hb_000658_020 0.0897917174 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Musa acuminata subsp. malaccensis]
14 Hb_004724_010 0.0961427958 - - -
15 Hb_000155_270 0.1119595679 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
16 Hb_000504_050 0.1160472364 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
17 Hb_012879_010 0.1167199352 - - conserved hypothetical protein [Ricinus communis]
18 Hb_012395_150 0.1194370108 transcription factor TF Family: Orphans PREDICTED: two-component response regulator-like APRR7 [Jatropha curcas]
19 Hb_004218_230 0.1263840442 - - Peptide transporter, putative [Ricinus communis]
20 Hb_005888_040 0.1274277899 - - PREDICTED: gibberellin 20 oxidase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_132438_010 Hb_132438_010 Hb_000751_210 Hb_000751_210 Hb_132438_010--Hb_000751_210 Hb_009543_040 Hb_009543_040 Hb_132438_010--Hb_009543_040 Hb_017866_010 Hb_017866_010 Hb_132438_010--Hb_017866_010 Hb_001157_130 Hb_001157_130 Hb_132438_010--Hb_001157_130 Hb_105446_010 Hb_105446_010 Hb_132438_010--Hb_105446_010 Hb_000575_010 Hb_000575_010 Hb_132438_010--Hb_000575_010 Hb_000751_210--Hb_009543_040 Hb_000751_210--Hb_105446_010 Hb_000751_210--Hb_017866_010 Hb_112011_010 Hb_112011_010 Hb_000751_210--Hb_112011_010 Hb_000751_210--Hb_001157_130 Hb_009543_040--Hb_000575_010 Hb_000616_060 Hb_000616_060 Hb_009543_040--Hb_000616_060 Hb_009543_040--Hb_001157_130 Hb_000891_060 Hb_000891_060 Hb_009543_040--Hb_000891_060 Hb_017866_010--Hb_112011_010 Hb_000658_020 Hb_000658_020 Hb_017866_010--Hb_000658_020 Hb_017866_010--Hb_105446_010 Hb_004724_010 Hb_004724_010 Hb_017866_010--Hb_004724_010 Hb_060272_010 Hb_060272_010 Hb_001157_130--Hb_060272_010 Hb_001157_130--Hb_000575_010 Hb_001157_130--Hb_000616_060 Hb_000155_270 Hb_000155_270 Hb_001157_130--Hb_000155_270 Hb_105446_010--Hb_112011_010 Hb_105446_010--Hb_000658_020 Hb_105446_010--Hb_004724_010 Hb_000575_010--Hb_000616_060 Hb_000575_010--Hb_000891_060 Hb_002282_030 Hb_002282_030 Hb_000575_010--Hb_002282_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.342219 0 0.461011 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.277289 0

CAGE analysis