Hb_132834_010

Information

Type -
Description -
Location Contig132834: 1300-1953
Sequence    

Annotation

kegg
ID egr:104448144
description protein disulfide-isomerase LQY1
nr
ID XP_012073817.1
description PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
swissprot
ID Q8GSJ6
description Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana GN=LQY1 PE=1 SV=1
trembl
ID A0A067KLC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08228 PE=4 SV=1
Gene Ontology
ID GO:0031072
description protein disulfide-isomerase lqy1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132834_010 0.0 - - PREDICTED: protein SPA, chloroplastic [Jatropha curcas]
2 Hb_000071_120 0.1571546026 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
3 Hb_141069_010 0.1589832434 - - conserved hypothetical protein [Ricinus communis]
4 Hb_011942_050 0.1605394026 - - PREDICTED: probable serine incorporator [Jatropha curcas]
5 Hb_000010_270 0.1632177986 - - PREDICTED: vignain [Jatropha curcas]
6 Hb_004355_040 0.1680644079 - - epoxide hydrolase, putative [Ricinus communis]
7 Hb_000238_030 0.1686247502 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_003097_070 0.1693617508 - - glucose regulated repressor protein, putative [Ricinus communis]
9 Hb_001454_200 0.1693868066 transcription factor TF Family: TRAF PREDICTED: uncharacterized protein LOC105643434 [Jatropha curcas]
10 Hb_086063_020 0.1716158581 transcription factor TF Family: SNF2 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Jatropha curcas]
11 Hb_001662_050 0.1718910862 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
12 Hb_007635_040 0.172033457 - - PREDICTED: WAT1-related protein At3g45870 isoform X1 [Jatropha curcas]
13 Hb_019641_030 0.1766971392 - - chitin elicitor receptor kinase 1 [Chrysanthemum boreale]
14 Hb_007982_030 0.1784133276 - - PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
15 Hb_002791_030 0.1801936262 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
16 Hb_002192_030 0.1805109161 - - conserved hypothetical protein [Ricinus communis]
17 Hb_134362_010 0.1824412527 - - PREDICTED: FAS-associated factor 2 [Jatropha curcas]
18 Hb_000236_400 0.1826533552 - - hypothetical protein JCGZ_01058 [Jatropha curcas]
19 Hb_000161_040 0.1830857778 - - PREDICTED: protein EI24 homolog [Jatropha curcas]
20 Hb_000152_700 0.1834725472 - - PREDICTED: E3 ubiquitin protein ligase RIN2 [Jatropha curcas]

Gene co-expression network

sample Hb_132834_010 Hb_132834_010 Hb_000071_120 Hb_000071_120 Hb_132834_010--Hb_000071_120 Hb_141069_010 Hb_141069_010 Hb_132834_010--Hb_141069_010 Hb_011942_050 Hb_011942_050 Hb_132834_010--Hb_011942_050 Hb_000010_270 Hb_000010_270 Hb_132834_010--Hb_000010_270 Hb_004355_040 Hb_004355_040 Hb_132834_010--Hb_004355_040 Hb_000238_030 Hb_000238_030 Hb_132834_010--Hb_000238_030 Hb_002495_080 Hb_002495_080 Hb_000071_120--Hb_002495_080 Hb_001016_050 Hb_001016_050 Hb_000071_120--Hb_001016_050 Hb_001789_030 Hb_001789_030 Hb_000071_120--Hb_001789_030 Hb_000048_060 Hb_000048_060 Hb_000071_120--Hb_000048_060 Hb_001500_110 Hb_001500_110 Hb_000071_120--Hb_001500_110 Hb_005276_060 Hb_005276_060 Hb_000071_120--Hb_005276_060 Hb_000635_030 Hb_000635_030 Hb_141069_010--Hb_000635_030 Hb_000243_300 Hb_000243_300 Hb_141069_010--Hb_000243_300 Hb_000258_110 Hb_000258_110 Hb_141069_010--Hb_000258_110 Hb_000130_020 Hb_000130_020 Hb_141069_010--Hb_000130_020 Hb_002259_080 Hb_002259_080 Hb_141069_010--Hb_002259_080 Hb_039946_050 Hb_039946_050 Hb_141069_010--Hb_039946_050 Hb_025477_040 Hb_025477_040 Hb_011942_050--Hb_025477_040 Hb_011942_050--Hb_000130_020 Hb_000365_030 Hb_000365_030 Hb_011942_050--Hb_000365_030 Hb_011942_050--Hb_000635_030 Hb_001366_210 Hb_001366_210 Hb_011942_050--Hb_001366_210 Hb_032202_200 Hb_032202_200 Hb_011942_050--Hb_032202_200 Hb_001153_050 Hb_001153_050 Hb_000010_270--Hb_001153_050 Hb_073973_150 Hb_073973_150 Hb_000010_270--Hb_073973_150 Hb_002475_040 Hb_002475_040 Hb_000010_270--Hb_002475_040 Hb_019641_030 Hb_019641_030 Hb_000010_270--Hb_019641_030 Hb_005323_010 Hb_005323_010 Hb_000010_270--Hb_005323_010 Hb_000010_270--Hb_004355_040 Hb_000630_030 Hb_000630_030 Hb_004355_040--Hb_000630_030 Hb_000580_030 Hb_000580_030 Hb_004355_040--Hb_000580_030 Hb_000318_040 Hb_000318_040 Hb_004355_040--Hb_000318_040 Hb_000413_070 Hb_000413_070 Hb_004355_040--Hb_000413_070 Hb_001103_090 Hb_001103_090 Hb_004355_040--Hb_001103_090 Hb_001558_040 Hb_001558_040 Hb_004355_040--Hb_001558_040 Hb_001442_060 Hb_001442_060 Hb_000238_030--Hb_001442_060 Hb_000238_030--Hb_000258_110 Hb_000001_170 Hb_000001_170 Hb_000238_030--Hb_000001_170 Hb_102698_010 Hb_102698_010 Hb_000238_030--Hb_102698_010 Hb_012733_070 Hb_012733_070 Hb_000238_030--Hb_012733_070 Hb_086063_020 Hb_086063_020 Hb_000238_030--Hb_086063_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.18471 1.568 1.02646 3.60198 2.86711 0.490872
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.21419 0.957167 0.446311 2.37604 1.93495

CAGE analysis