Hb_132880_030

Information

Type -
Description -
Location Contig132880: 31134-34316
Sequence    

Annotation

kegg
ID mdm:103438799
description GDSL esterase/lipase At5g03610-like
nr
ID KDP35844.1
description hypothetical protein JCGZ_10325 [Jatropha curcas]
swissprot
ID Q9LZS7
description GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1
trembl
ID A0A067KVG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10325 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at5g03610-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132880_030 0.0 - - hypothetical protein JCGZ_10325 [Jatropha curcas]
2 Hb_005511_050 0.0528381222 - - hypothetical protein POPTR_0008s04130g [Populus trichocarpa]
3 Hb_000220_160 0.0992306657 - - hypothetical protein B456_003G184800 [Gossypium raimondii]
4 Hb_000251_100 0.1165264369 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_006478_180 0.1235942986 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
6 Hb_001080_310 0.1249963479 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
7 Hb_112082_030 0.1262360827 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
8 Hb_001999_220 0.1269434613 - - PREDICTED: cytochrome P450 86A1 [Jatropha curcas]
9 Hb_012019_030 0.1287909162 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
10 Hb_004195_040 0.130278304 - - salicylic acid methyl transferase [Capsicum annuum]
11 Hb_000813_120 0.1330985808 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
12 Hb_002234_150 0.1355377242 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
13 Hb_002758_040 0.1366512833 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000160_230 0.1368895565 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
15 Hb_039342_030 0.1377213417 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004185_040 0.1381854848 - - polygalacturonase, putative [Ricinus communis]
17 Hb_002874_080 0.1390137448 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
18 Hb_001141_170 0.1390962653 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
19 Hb_007810_140 0.1395712184 - - Ankyrin repeat-containing protein [Medicago truncatula]
20 Hb_000859_040 0.1395808542 - - Early nodulin 16 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_132880_030 Hb_132880_030 Hb_005511_050 Hb_005511_050 Hb_132880_030--Hb_005511_050 Hb_000220_160 Hb_000220_160 Hb_132880_030--Hb_000220_160 Hb_000251_100 Hb_000251_100 Hb_132880_030--Hb_000251_100 Hb_006478_180 Hb_006478_180 Hb_132880_030--Hb_006478_180 Hb_001080_310 Hb_001080_310 Hb_132880_030--Hb_001080_310 Hb_112082_030 Hb_112082_030 Hb_132880_030--Hb_112082_030 Hb_000160_230 Hb_000160_230 Hb_005511_050--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_005511_050--Hb_007810_140 Hb_039342_030 Hb_039342_030 Hb_005511_050--Hb_039342_030 Hb_001999_220 Hb_001999_220 Hb_005511_050--Hb_001999_220 Hb_000859_040 Hb_000859_040 Hb_005511_050--Hb_000859_040 Hb_000597_110 Hb_000597_110 Hb_000220_160--Hb_000597_110 Hb_032631_010 Hb_032631_010 Hb_000220_160--Hb_032631_010 Hb_002874_080 Hb_002874_080 Hb_000220_160--Hb_002874_080 Hb_000220_160--Hb_005511_050 Hb_031862_240 Hb_031862_240 Hb_000220_160--Hb_031862_240 Hb_000251_100--Hb_001080_310 Hb_000251_100--Hb_005511_050 Hb_002758_040 Hb_002758_040 Hb_000251_100--Hb_002758_040 Hb_002234_150 Hb_002234_150 Hb_000251_100--Hb_002234_150 Hb_004185_040 Hb_004185_040 Hb_000251_100--Hb_004185_040 Hb_004195_040 Hb_004195_040 Hb_000251_100--Hb_004195_040 Hb_003538_020 Hb_003538_020 Hb_006478_180--Hb_003538_020 Hb_006478_180--Hb_002758_040 Hb_006478_180--Hb_112082_030 Hb_006478_180--Hb_005511_050 Hb_000010_120 Hb_000010_120 Hb_006478_180--Hb_000010_120 Hb_002281_070 Hb_002281_070 Hb_001080_310--Hb_002281_070 Hb_001080_310--Hb_002234_150 Hb_012019_030 Hb_012019_030 Hb_001080_310--Hb_012019_030 Hb_001141_170 Hb_001141_170 Hb_001080_310--Hb_001141_170 Hb_001047_250 Hb_001047_250 Hb_001080_310--Hb_001047_250 Hb_001080_310--Hb_001999_220 Hb_001357_260 Hb_001357_260 Hb_112082_030--Hb_001357_260 Hb_000189_260 Hb_000189_260 Hb_112082_030--Hb_000189_260 Hb_002917_010 Hb_002917_010 Hb_112082_030--Hb_002917_010 Hb_008406_010 Hb_008406_010 Hb_112082_030--Hb_008406_010 Hb_112082_030--Hb_005511_050 Hb_002890_400 Hb_002890_400 Hb_112082_030--Hb_002890_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.210612 0.0163707 0.0175906 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0372599 0 1.00265 0

CAGE analysis