Hb_132915_010

Information

Type -
Description -
Location Contig132915: 36-521
Sequence    

Annotation

kegg
ID pda:103700431
description uncharacterized LOC103700431
nr
ID XP_008780598.1
description PREDICTED: uncharacterized protein LOC103700431, partial [Phoenix dactylifera]
swissprot
ID -
description -
trembl
ID W9QCU7
description Uncharacterized protein OS=Morus notabilis GN=L484_006131 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_132915_010 0.0 - - PREDICTED: uncharacterized protein LOC103700431, partial [Phoenix dactylifera]
2 Hb_181909_010 0.2072527139 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
3 Hb_007380_010 0.2707137276 - - hypothetical protein EUGRSUZ_L00213, partial [Eucalyptus grandis]
4 Hb_062585_010 0.3300391752 - - hypothetical protein JCGZ_19532 [Jatropha curcas]
5 Hb_000252_030 0.3515645568 - - Heme-binding protein, putative [Ricinus communis]
6 Hb_000347_500 0.3541913936 transcription factor TF Family: GRF conserved hypothetical protein [Ricinus communis]
7 Hb_130788_010 0.3546534173 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
8 Hb_000326_030 0.3608236187 - - hypothetical protein PRUPE_ppa013909mg [Prunus persica]
9 Hb_005504_010 0.3623601921 - - hypothetical protein POPTR_1605s00200g [Populus trichocarpa]
10 Hb_022132_040 0.3640134886 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
11 Hb_003752_050 0.3664358698 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
12 Hb_000061_390 0.3684108041 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
13 Hb_002243_040 0.3719662032 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
14 Hb_007537_010 0.3789313509 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_001749_010 0.3793871679 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
16 Hb_089140_060 0.3807912043 - - Uncharacterized protein TCM_037529 [Theobroma cacao]
17 Hb_006120_100 0.3813299299 - - -
18 Hb_007513_010 0.3814255828 - - -
19 Hb_000363_440 0.3815530386 - - -
20 Hb_000939_010 0.3825683888 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]

Gene co-expression network

sample Hb_132915_010 Hb_132915_010 Hb_181909_010 Hb_181909_010 Hb_132915_010--Hb_181909_010 Hb_007380_010 Hb_007380_010 Hb_132915_010--Hb_007380_010 Hb_062585_010 Hb_062585_010 Hb_132915_010--Hb_062585_010 Hb_000252_030 Hb_000252_030 Hb_132915_010--Hb_000252_030 Hb_000347_500 Hb_000347_500 Hb_132915_010--Hb_000347_500 Hb_130788_010 Hb_130788_010 Hb_132915_010--Hb_130788_010 Hb_181909_010--Hb_007380_010 Hb_008511_010 Hb_008511_010 Hb_181909_010--Hb_008511_010 Hb_000190_100 Hb_000190_100 Hb_181909_010--Hb_000190_100 Hb_000192_110 Hb_000192_110 Hb_181909_010--Hb_000192_110 Hb_007537_010 Hb_007537_010 Hb_181909_010--Hb_007537_010 Hb_007380_010--Hb_000190_100 Hb_007380_010--Hb_062585_010 Hb_007380_010--Hb_007537_010 Hb_000567_080 Hb_000567_080 Hb_007380_010--Hb_000567_080 Hb_001396_170 Hb_001396_170 Hb_062585_010--Hb_001396_170 Hb_000003_390 Hb_000003_390 Hb_062585_010--Hb_000003_390 Hb_000574_150 Hb_000574_150 Hb_062585_010--Hb_000574_150 Hb_002804_050 Hb_002804_050 Hb_062585_010--Hb_002804_050 Hb_005504_010 Hb_005504_010 Hb_062585_010--Hb_005504_010 Hb_002735_040 Hb_002735_040 Hb_062585_010--Hb_002735_040 Hb_108886_010 Hb_108886_010 Hb_000252_030--Hb_108886_010 Hb_001021_060 Hb_001021_060 Hb_000252_030--Hb_001021_060 Hb_003952_140 Hb_003952_140 Hb_000252_030--Hb_003952_140 Hb_021419_050 Hb_021419_050 Hb_000252_030--Hb_021419_050 Hb_001338_060 Hb_001338_060 Hb_000252_030--Hb_001338_060 Hb_000042_140 Hb_000042_140 Hb_000252_030--Hb_000042_140 Hb_000326_030 Hb_000326_030 Hb_000347_500--Hb_000326_030 Hb_000415_060 Hb_000415_060 Hb_000347_500--Hb_000415_060 Hb_006698_050 Hb_006698_050 Hb_000347_500--Hb_006698_050 Hb_000939_010 Hb_000939_010 Hb_000347_500--Hb_000939_010 Hb_000270_560 Hb_000270_560 Hb_000347_500--Hb_000270_560 Hb_001749_010 Hb_001749_010 Hb_000347_500--Hb_001749_010 Hb_002243_040 Hb_002243_040 Hb_130788_010--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_130788_010--Hb_013925_010 Hb_003752_050 Hb_003752_050 Hb_130788_010--Hb_003752_050 Hb_019654_080 Hb_019654_080 Hb_130788_010--Hb_019654_080 Hb_005470_010 Hb_005470_010 Hb_130788_010--Hb_005470_010 Hb_000160_200 Hb_000160_200 Hb_130788_010--Hb_000160_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.562472 0.376899 0 0 0 0.28134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.386056 0.0481757 0

CAGE analysis