Hb_133076_010

Information

Type -
Description -
Location Contig133076: 2531-3774
Sequence    

Annotation

kegg
ID pop:POPTR_0001s31040g
description hypothetical protein
nr
ID XP_011000136.1
description PREDICTED: scopoletin glucosyltransferase-like [Populus euphratica]
swissprot
ID Q9AT54
description Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=1
trembl
ID U5GVM0
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s31040g PE=3 SV=1
Gene Ontology
ID GO:0016758
description scopoletin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133076_010 0.0 - - PREDICTED: scopoletin glucosyltransferase-like [Populus euphratica]
2 Hb_001790_060 0.0453275272 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
3 Hb_000540_080 0.0705973609 - - PREDICTED: laccase-17 [Jatropha curcas]
4 Hb_000363_070 0.0832273252 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001894_100 0.0838524748 - - PREDICTED: kininogen-1-like [Jatropha curcas]
6 Hb_045260_010 0.0853705199 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
7 Hb_000268_050 0.0879508441 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
8 Hb_000160_120 0.0905040118 - - conserved hypothetical protein [Ricinus communis]
9 Hb_096907_010 0.0926270474 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
10 Hb_002329_050 0.0932892021 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000223_090 0.0936303464 - - Blue copper protein precursor, putative [Ricinus communis]
12 Hb_001437_170 0.0950289892 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
13 Hb_034299_010 0.0959379949 - - F-box and wd40 domain protein, putative [Ricinus communis]
14 Hb_002250_040 0.0961420201 - - PREDICTED: transcription repressor OFP17 [Jatropha curcas]
15 Hb_005228_050 0.0970313095 - - PREDICTED: uncharacterized protein LOC104896168 [Beta vulgaris subsp. vulgaris]
16 Hb_006718_030 0.0981185845 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
17 Hb_000115_030 0.0986253701 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
18 Hb_000724_040 0.0987772193 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]
19 Hb_001051_020 0.0990541145 - - hypothetical protein L484_008044 [Morus notabilis]
20 Hb_003528_100 0.0996497574 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_133076_010 Hb_133076_010 Hb_001790_060 Hb_001790_060 Hb_133076_010--Hb_001790_060 Hb_000540_080 Hb_000540_080 Hb_133076_010--Hb_000540_080 Hb_000363_070 Hb_000363_070 Hb_133076_010--Hb_000363_070 Hb_001894_100 Hb_001894_100 Hb_133076_010--Hb_001894_100 Hb_045260_010 Hb_045260_010 Hb_133076_010--Hb_045260_010 Hb_000268_050 Hb_000268_050 Hb_133076_010--Hb_000268_050 Hb_001790_060--Hb_001894_100 Hb_001790_060--Hb_000268_050 Hb_003528_100 Hb_003528_100 Hb_001790_060--Hb_003528_100 Hb_000223_090 Hb_000223_090 Hb_001790_060--Hb_000223_090 Hb_005348_050 Hb_005348_050 Hb_001790_060--Hb_005348_050 Hb_000540_080--Hb_045260_010 Hb_000540_080--Hb_000363_070 Hb_005228_050 Hb_005228_050 Hb_000540_080--Hb_005228_050 Hb_000724_040 Hb_000724_040 Hb_000540_080--Hb_000724_040 Hb_011362_010 Hb_011362_010 Hb_000540_080--Hb_011362_010 Hb_000160_120 Hb_000160_120 Hb_000540_080--Hb_000160_120 Hb_000363_070--Hb_045260_010 Hb_003647_070 Hb_003647_070 Hb_000363_070--Hb_003647_070 Hb_002010_040 Hb_002010_040 Hb_000363_070--Hb_002010_040 Hb_000140_040 Hb_000140_040 Hb_000363_070--Hb_000140_040 Hb_000007_290 Hb_000007_290 Hb_000363_070--Hb_000007_290 Hb_001894_100--Hb_005348_050 Hb_008253_050 Hb_008253_050 Hb_001894_100--Hb_008253_050 Hb_001894_100--Hb_000223_090 Hb_003151_020 Hb_003151_020 Hb_001894_100--Hb_003151_020 Hb_045260_010--Hb_003647_070 Hb_045260_010--Hb_002010_040 Hb_045260_010--Hb_000007_290 Hb_099263_010 Hb_099263_010 Hb_045260_010--Hb_099263_010 Hb_002329_050 Hb_002329_050 Hb_000268_050--Hb_002329_050 Hb_000268_050--Hb_011362_010 Hb_000268_050--Hb_003528_100 Hb_000268_050--Hb_000160_120 Hb_001437_170 Hb_001437_170 Hb_000268_050--Hb_001437_170 Hb_096907_010 Hb_096907_010 Hb_000268_050--Hb_096907_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.13872 0.326751 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0164241 0.83395

CAGE analysis