Hb_133748_010

Information

Type -
Description -
Location Contig133748: 362-754
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133748_010 0.0 - - -
2 Hb_002035_080 0.2080995768 - - unnamed protein product [Vitis vinifera]
3 Hb_002035_090 0.2172902737 - - -
4 Hb_002863_100 0.2205840555 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
5 Hb_000098_020 0.2362152707 transcription factor TF Family: GRAS GRAS family transcription factor family protein [Theobroma cacao]
6 Hb_010531_050 0.2366438227 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
7 Hb_001622_010 0.23890557 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_000157_200 0.2392925136 - - PREDICTED: putative disease resistance protein RGA4 isoform X3 [Eucalyptus grandis]
9 Hb_007749_010 0.243457158 - - -
10 Hb_009710_020 0.2516236398 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
11 Hb_065841_010 0.2724134128 - - hypothetical protein JCGZ_18376 [Jatropha curcas]
12 Hb_007846_040 0.2739659642 - - PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
13 Hb_002863_090 0.2742971858 desease resistance Gene Name: Speriolin_N hypothetical protein JCGZ_06191 [Jatropha curcas]
14 Hb_000453_100 0.2744276404 - - PREDICTED: metallothionein-like protein 1 [Sesamum indicum]
15 Hb_007157_060 0.2758113985 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
16 Hb_011716_110 0.2770242273 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
17 Hb_028472_010 0.2787314059 - - glycosyltransferase, putative [Ricinus communis]
18 Hb_001882_130 0.2802032685 transcription factor TF Family: mTERF hypothetical protein VITISV_028996 [Vitis vinifera]
19 Hb_001493_080 0.2814720595 - - PREDICTED: RING-H2 finger protein ATL3-like [Jatropha curcas]
20 Hb_054885_010 0.281705526 - - -

Gene co-expression network

sample Hb_133748_010 Hb_133748_010 Hb_002035_080 Hb_002035_080 Hb_133748_010--Hb_002035_080 Hb_002035_090 Hb_002035_090 Hb_133748_010--Hb_002035_090 Hb_002863_100 Hb_002863_100 Hb_133748_010--Hb_002863_100 Hb_000098_020 Hb_000098_020 Hb_133748_010--Hb_000098_020 Hb_010531_050 Hb_010531_050 Hb_133748_010--Hb_010531_050 Hb_001622_010 Hb_001622_010 Hb_133748_010--Hb_001622_010 Hb_000193_140 Hb_000193_140 Hb_002035_080--Hb_000193_140 Hb_135442_010 Hb_135442_010 Hb_002035_080--Hb_135442_010 Hb_002035_080--Hb_002035_090 Hb_000334_180 Hb_000334_180 Hb_002035_080--Hb_000334_180 Hb_008778_010 Hb_008778_010 Hb_002035_080--Hb_008778_010 Hb_006615_100 Hb_006615_100 Hb_002035_090--Hb_006615_100 Hb_007603_020 Hb_007603_020 Hb_002035_090--Hb_007603_020 Hb_026206_020 Hb_026206_020 Hb_002035_090--Hb_026206_020 Hb_007680_020 Hb_007680_020 Hb_002035_090--Hb_007680_020 Hb_000997_410 Hb_000997_410 Hb_002035_090--Hb_000997_410 Hb_009710_020 Hb_009710_020 Hb_002863_100--Hb_009710_020 Hb_000157_200 Hb_000157_200 Hb_002863_100--Hb_000157_200 Hb_000453_150 Hb_000453_150 Hb_002863_100--Hb_000453_150 Hb_002863_100--Hb_001622_010 Hb_004097_120 Hb_004097_120 Hb_002863_100--Hb_004097_120 Hb_010560_060 Hb_010560_060 Hb_000098_020--Hb_010560_060 Hb_002111_060 Hb_002111_060 Hb_000098_020--Hb_002111_060 Hb_000098_020--Hb_000157_200 Hb_000516_040 Hb_000516_040 Hb_000098_020--Hb_000516_040 Hb_078477_050 Hb_078477_050 Hb_000098_020--Hb_078477_050 Hb_000258_150 Hb_000258_150 Hb_000098_020--Hb_000258_150 Hb_010531_050--Hb_000997_410 Hb_010531_050--Hb_001622_010 Hb_031527_070 Hb_031527_070 Hb_010531_050--Hb_031527_070 Hb_114984_010 Hb_114984_010 Hb_010531_050--Hb_114984_010 Hb_000984_250 Hb_000984_250 Hb_010531_050--Hb_000984_250 Hb_005464_030 Hb_005464_030 Hb_010531_050--Hb_005464_030 Hb_001622_010--Hb_005464_030 Hb_002196_010 Hb_002196_010 Hb_001622_010--Hb_002196_010 Hb_001865_040 Hb_001865_040 Hb_001622_010--Hb_001865_040 Hb_178127_010 Hb_178127_010 Hb_001622_010--Hb_178127_010 Hb_128695_030 Hb_128695_030 Hb_001622_010--Hb_128695_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.46648 1.74665 0.136928 1.587 0.504061 0.898352
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.51556 0.626829 0.282946

CAGE analysis