Hb_133974_010

Information

Type -
Description -
Location Contig133974: 145-750
Sequence    

Annotation

kegg
ID rcu:RCOM_0634400
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID XP_011045314.1
description PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
swissprot
ID O65399
description Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3
trembl
ID B9S175
description Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_0634400 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_133974_010 0.0 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
2 Hb_002973_050 0.0509013344 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
3 Hb_005711_030 0.0710876815 - - hypothetical protein RCOM_0460020 [Ricinus communis]
4 Hb_000676_230 0.0727432244 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
5 Hb_004917_020 0.0778425675 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF2.2-like isoform X2 [Populus euphratica]
6 Hb_147006_010 0.0788253557 - - receptor like protein 35 [Arabidopsis thaliana]
7 Hb_004032_290 0.0808635586 - - protein binding protein, putative [Ricinus communis]
8 Hb_000364_090 0.0809568134 - - PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
9 Hb_004650_120 0.0813694403 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
10 Hb_000813_070 0.0923318571 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002835_070 0.092351202 - - conserved hypothetical protein [Ricinus communis]
12 Hb_020375_010 0.0941836342 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
13 Hb_000620_040 0.0952922602 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
14 Hb_001279_400 0.0963005847 - - PREDICTED: uncharacterized protein LOC105633544 [Jatropha curcas]
15 Hb_000368_050 0.1027740416 - - beta-galactosidase, putative [Ricinus communis]
16 Hb_003032_030 0.1038298417 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
17 Hb_000000_050 0.1058733996 - - conserved hypothetical protein [Ricinus communis]
18 Hb_182869_010 0.1058914148 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
19 Hb_002073_270 0.1061768415 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
20 Hb_015934_090 0.1087122978 - - PREDICTED: uncharacterized protein LOC105640158 [Jatropha curcas]

Gene co-expression network

sample Hb_133974_010 Hb_133974_010 Hb_002973_050 Hb_002973_050 Hb_133974_010--Hb_002973_050 Hb_005711_030 Hb_005711_030 Hb_133974_010--Hb_005711_030 Hb_000676_230 Hb_000676_230 Hb_133974_010--Hb_000676_230 Hb_004917_020 Hb_004917_020 Hb_133974_010--Hb_004917_020 Hb_147006_010 Hb_147006_010 Hb_133974_010--Hb_147006_010 Hb_004032_290 Hb_004032_290 Hb_133974_010--Hb_004032_290 Hb_002973_050--Hb_004917_020 Hb_002835_070 Hb_002835_070 Hb_002973_050--Hb_002835_070 Hb_001279_400 Hb_001279_400 Hb_002973_050--Hb_001279_400 Hb_002973_050--Hb_005711_030 Hb_000813_070 Hb_000813_070 Hb_002973_050--Hb_000813_070 Hb_005711_030--Hb_000813_070 Hb_001289_070 Hb_001289_070 Hb_005711_030--Hb_001289_070 Hb_000103_440 Hb_000103_440 Hb_005711_030--Hb_000103_440 Hb_004650_120 Hb_004650_120 Hb_005711_030--Hb_004650_120 Hb_000017_180 Hb_000017_180 Hb_005711_030--Hb_000017_180 Hb_000676_230--Hb_004032_290 Hb_010142_060 Hb_010142_060 Hb_000676_230--Hb_010142_060 Hb_000368_050 Hb_000368_050 Hb_000676_230--Hb_000368_050 Hb_000676_230--Hb_004650_120 Hb_000364_090 Hb_000364_090 Hb_000676_230--Hb_000364_090 Hb_004917_020--Hb_001279_400 Hb_002171_050 Hb_002171_050 Hb_004917_020--Hb_002171_050 Hb_000137_050 Hb_000137_050 Hb_004917_020--Hb_000137_050 Hb_004917_020--Hb_002835_070 Hb_010164_030 Hb_010164_030 Hb_147006_010--Hb_010164_030 Hb_000620_040 Hb_000620_040 Hb_147006_010--Hb_000620_040 Hb_003032_030 Hb_003032_030 Hb_147006_010--Hb_003032_030 Hb_015934_090 Hb_015934_090 Hb_147006_010--Hb_015934_090 Hb_147006_010--Hb_004032_290 Hb_002874_200 Hb_002874_200 Hb_004032_290--Hb_002874_200 Hb_036520_030 Hb_036520_030 Hb_004032_290--Hb_036520_030 Hb_007185_050 Hb_007185_050 Hb_004032_290--Hb_007185_050 Hb_000395_310 Hb_000395_310 Hb_004032_290--Hb_000395_310 Hb_000230_410 Hb_000230_410 Hb_004032_290--Hb_000230_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.795484 1.31989 5.4522 0 0.0381869
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.256393 3.33449

CAGE analysis