Hb_134279_010

Information

Type -
Description -
Location Contig134279: 2135-2485
Sequence    

Annotation

kegg
ID pop:POPTR_0002s24440g
description hypothetical protein
nr
ID XP_012085102.1
description PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUA6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17541 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134279_010 0.0 - - PREDICTED: uncharacterized protein LOC105644390 [Jatropha curcas]
2 Hb_003895_040 0.1295954233 - - hypothetical protein CISIN_1g0006512mg, partial [Citrus sinensis]
3 Hb_000679_210 0.1299780251 - - grr1, plant, putative [Ricinus communis]
4 Hb_015183_080 0.1365878176 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
5 Hb_014497_020 0.1475618205 - - PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Jatropha curcas]
6 Hb_000512_030 0.1513644659 - - wall-associated kinase, putative [Ricinus communis]
7 Hb_003604_030 0.1598857275 - - hypothetical protein MIMGU_mgv1a025764mg, partial [Erythranthe guttata]
8 Hb_000105_030 0.1610339445 - - fkbp-rapamycin associated protein, putative [Ricinus communis]
9 Hb_113203_010 0.1645084842 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
10 Hb_001054_120 0.1720117539 - - PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Jatropha curcas]
11 Hb_000574_530 0.1722325756 - - PREDICTED: pre-mRNA-processing-splicing factor 8 [Jatropha curcas]
12 Hb_001916_070 0.1723957492 - - PREDICTED: phytochrome C [Jatropha curcas]
13 Hb_001124_050 0.1739055668 transcription factor TF Family: SNF2 PREDICTED: chromatin structure-remodeling complex protein SYD-like [Jatropha curcas]
14 Hb_002521_020 0.1758966556 - - PREDICTED: pentatricopeptide repeat-containing protein At1g03100, mitochondrial-like isoform X2 [Jatropha curcas]
15 Hb_003014_030 0.1771974399 - - PREDICTED: thyroid adenoma-associated protein homolog [Jatropha curcas]
16 Hb_003211_040 0.1801806098 - - PREDICTED: uncharacterized protein LOC105634664 isoform X1 [Jatropha curcas]
17 Hb_010180_060 0.1802887326 - - PREDICTED: uncharacterized protein LOC105648049 [Jatropha curcas]
18 Hb_000492_080 0.1809749654 - - PREDICTED: probable sucrose-phosphate synthase 1 [Jatropha curcas]
19 Hb_000445_130 0.1822080885 transcription factor TF Family: C3H hypothetical protein JCGZ_12159 [Jatropha curcas]
20 Hb_171554_040 0.1822331961 - - PREDICTED: phytanoyl-CoA dioxygenase [Populus euphratica]

Gene co-expression network

sample Hb_134279_010 Hb_134279_010 Hb_003895_040 Hb_003895_040 Hb_134279_010--Hb_003895_040 Hb_000679_210 Hb_000679_210 Hb_134279_010--Hb_000679_210 Hb_015183_080 Hb_015183_080 Hb_134279_010--Hb_015183_080 Hb_014497_020 Hb_014497_020 Hb_134279_010--Hb_014497_020 Hb_000512_030 Hb_000512_030 Hb_134279_010--Hb_000512_030 Hb_003604_030 Hb_003604_030 Hb_134279_010--Hb_003604_030 Hb_003895_040--Hb_014497_020 Hb_001054_120 Hb_001054_120 Hb_003895_040--Hb_001054_120 Hb_003895_040--Hb_000512_030 Hb_007576_210 Hb_007576_210 Hb_003895_040--Hb_007576_210 Hb_001124_050 Hb_001124_050 Hb_003895_040--Hb_001124_050 Hb_007120_060 Hb_007120_060 Hb_003895_040--Hb_007120_060 Hb_000571_160 Hb_000571_160 Hb_000679_210--Hb_000571_160 Hb_000679_210--Hb_000512_030 Hb_011861_080 Hb_011861_080 Hb_000679_210--Hb_011861_080 Hb_002631_200 Hb_002631_200 Hb_000679_210--Hb_002631_200 Hb_000789_240 Hb_000789_240 Hb_000679_210--Hb_000789_240 Hb_002521_020 Hb_002521_020 Hb_015183_080--Hb_002521_020 Hb_003014_030 Hb_003014_030 Hb_015183_080--Hb_003014_030 Hb_000445_130 Hb_000445_130 Hb_015183_080--Hb_000445_130 Hb_015183_080--Hb_001054_120 Hb_000367_020 Hb_000367_020 Hb_015183_080--Hb_000367_020 Hb_015183_080--Hb_001124_050 Hb_014497_020--Hb_007576_210 Hb_014497_020--Hb_001124_050 Hb_003211_040 Hb_003211_040 Hb_014497_020--Hb_003211_040 Hb_001662_180 Hb_001662_180 Hb_014497_020--Hb_001662_180 Hb_009486_170 Hb_009486_170 Hb_014497_020--Hb_009486_170 Hb_002027_190 Hb_002027_190 Hb_000512_030--Hb_002027_190 Hb_000512_030--Hb_000571_160 Hb_000512_030--Hb_014497_020 Hb_000631_110 Hb_000631_110 Hb_000512_030--Hb_000631_110 Hb_003604_040 Hb_003604_040 Hb_003604_030--Hb_003604_040 Hb_000162_020 Hb_000162_020 Hb_003604_030--Hb_000162_020 Hb_001401_060 Hb_001401_060 Hb_003604_030--Hb_001401_060 Hb_011947_050 Hb_011947_050 Hb_003604_030--Hb_011947_050 Hb_001117_160 Hb_001117_160 Hb_003604_030--Hb_001117_160 Hb_174865_020 Hb_174865_020 Hb_003604_030--Hb_174865_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.978982 7.73111 1.08592 4.34033 2.69174 4.21086
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.259812 0.204183 3.43266 5.15641 6.14296

CAGE analysis