Hb_134708_010

Information

Type -
Description -
Location Contig134708: 166-666
Sequence    

Annotation

kegg
ID sot:102604542
description uncharacterized LOC102604542
nr
ID XP_006354980.1
description PREDICTED: uncharacterized protein LOC102604542 [Solanum tuberosum]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134708_010 0.0 - - PREDICTED: uncharacterized protein LOC102604542 [Solanum tuberosum]
2 Hb_006162_060 0.1904829738 - - PREDICTED: LYR motif-containing protein At3g19508 [Jatropha curcas]
3 Hb_001235_050 0.1910620475 - - PREDICTED: proteasome activator subunit 4 [Nelumbo nucifera]
4 Hb_000832_210 0.2696787078 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
5 Hb_011081_040 0.3266962943 - - hypothetical protein JCGZ_20956 [Jatropha curcas]
6 Hb_004970_210 0.3342963344 - - -
7 Hb_001089_080 0.3506800079 - - hypothetical protein glysoja_044047 [Glycine soja]
8 Hb_001579_260 0.3551927344 - - putative ADP-ribolylation factor [Arabidopsis thaliana]
9 Hb_000943_020 0.3561589181 - - 60S ribosomal protein L30, putative [Ricinus communis]
10 Hb_138462_010 0.3594234492 - - PREDICTED: SUMO-conjugating enzyme UBC9-A-like isoform X1 [Elaeis guineensis]
11 Hb_001268_090 0.3631429101 - - Uncharacterized protein TCM_020504 [Theobroma cacao]
12 Hb_130367_010 0.367023227 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Jatropha curcas]
13 Hb_006910_050 0.3690068772 - - hypothetical protein CISIN_1g0480481mg, partial [Citrus sinensis]
14 Hb_020712_050 0.3691171662 transcription factor TF Family: B3 PREDICTED: B3 domain-containing transcription factor VRN1-like [Jatropha curcas]
15 Hb_041601_010 0.3710767974 - - -
16 Hb_000953_120 0.3723688516 - - -
17 Hb_011540_030 0.3743645052 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX5-like isoform X6 [Glycine max]
18 Hb_000427_070 0.3846143633 - - -
19 Hb_051055_010 0.3851790758 - - -
20 Hb_000270_540 0.3859886053 - - hypothetical protein JCGZ_11527 [Jatropha curcas]

Gene co-expression network

sample Hb_134708_010 Hb_134708_010 Hb_006162_060 Hb_006162_060 Hb_134708_010--Hb_006162_060 Hb_001235_050 Hb_001235_050 Hb_134708_010--Hb_001235_050 Hb_000832_210 Hb_000832_210 Hb_134708_010--Hb_000832_210 Hb_011081_040 Hb_011081_040 Hb_134708_010--Hb_011081_040 Hb_004970_210 Hb_004970_210 Hb_134708_010--Hb_004970_210 Hb_001089_080 Hb_001089_080 Hb_134708_010--Hb_001089_080 Hb_006162_060--Hb_001235_050 Hb_041601_010 Hb_041601_010 Hb_006162_060--Hb_041601_010 Hb_000953_120 Hb_000953_120 Hb_006162_060--Hb_000953_120 Hb_030885_020 Hb_030885_020 Hb_006162_060--Hb_030885_020 Hb_000251_020 Hb_000251_020 Hb_006162_060--Hb_000251_020 Hb_001235_050--Hb_030885_020 Hb_001235_050--Hb_041601_010 Hb_001235_050--Hb_000251_020 Hb_005479_050 Hb_005479_050 Hb_001235_050--Hb_005479_050 Hb_138462_010 Hb_138462_010 Hb_000832_210--Hb_138462_010 Hb_176825_010 Hb_176825_010 Hb_000832_210--Hb_176825_010 Hb_141296_010 Hb_141296_010 Hb_000832_210--Hb_141296_010 Hb_000133_070 Hb_000133_070 Hb_000832_210--Hb_000133_070 Hb_001268_090 Hb_001268_090 Hb_000832_210--Hb_001268_090 Hb_011540_030 Hb_011540_030 Hb_011081_040--Hb_011540_030 Hb_001141_290 Hb_001141_290 Hb_011081_040--Hb_001141_290 Hb_094890_010 Hb_094890_010 Hb_011081_040--Hb_094890_010 Hb_000427_070 Hb_000427_070 Hb_011081_040--Hb_000427_070 Hb_067793_010 Hb_067793_010 Hb_011081_040--Hb_067793_010 Hb_007012_070 Hb_007012_070 Hb_004970_210--Hb_007012_070 Hb_152362_010 Hb_152362_010 Hb_004970_210--Hb_152362_010 Hb_004970_210--Hb_001235_050 Hb_004970_210--Hb_011081_040 Hb_003177_120 Hb_003177_120 Hb_004970_210--Hb_003177_120 Hb_021943_070 Hb_021943_070 Hb_001089_080--Hb_021943_070 Hb_005107_020 Hb_005107_020 Hb_001089_080--Hb_005107_020 Hb_001579_260 Hb_001579_260 Hb_001089_080--Hb_001579_260 Hb_022891_010 Hb_022891_010 Hb_001089_080--Hb_022891_010 Hb_130367_010 Hb_130367_010 Hb_001089_080--Hb_130367_010 Hb_008096_020 Hb_008096_020 Hb_001089_080--Hb_008096_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.464183 0 0.258036
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.255663 0.0688911 0

CAGE analysis