Hb_134932_010

Information

Type -
Description -
Location Contig134932: 55-819
Sequence    

Annotation

kegg
ID pop:POPTR_0001s07630g
description hypothetical protein
nr
ID XP_011013617.1
description PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
swissprot
ID Q9LN59
description Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2
trembl
ID U5GNU6
description Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0001s07630g PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09845: 432-727
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134932_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
2 Hb_004994_190 0.1072404248 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Jatropha curcas]
3 Hb_000685_130 0.1168837203 - - PREDICTED: uncharacterized protein LOC105351820 [Fragaria vesca subsp. vesca]
4 Hb_000412_090 0.1854999021 - - receptor serine/threonine kinase, putative [Ricinus communis]
5 Hb_086002_010 0.1891181148 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
6 Hb_001556_020 0.1925780201 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
7 Hb_002783_140 0.1935790792 - - PREDICTED: uncharacterized protein LOC105635332 [Jatropha curcas]
8 Hb_004767_020 0.1971486436 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
9 Hb_002890_320 0.2049351877 - - PREDICTED: uncharacterized protein LOC105631579 [Jatropha curcas]
10 Hb_005569_030 0.2072119309 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Jatropha curcas]
11 Hb_001515_030 0.2078056769 - - UDP-glucosyltransferase, putative [Ricinus communis]
12 Hb_000313_100 0.2078198781 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
13 Hb_028285_020 0.2085941762 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
14 Hb_002010_050 0.2098769063 - - conserved hypothetical protein [Ricinus communis]
15 Hb_175670_010 0.2126995224 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
16 Hb_064293_010 0.2127617738 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
17 Hb_033312_090 0.2133590288 - - PREDICTED: HMG-Y-related protein A-like isoform X1 [Jatropha curcas]
18 Hb_033153_040 0.2137732398 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_012098_180 0.2162045473 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_20174 [Jatropha curcas]
20 Hb_001951_230 0.2196296014 - - PREDICTED: phytochrome E isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_134932_010 Hb_134932_010 Hb_004994_190 Hb_004994_190 Hb_134932_010--Hb_004994_190 Hb_000685_130 Hb_000685_130 Hb_134932_010--Hb_000685_130 Hb_000412_090 Hb_000412_090 Hb_134932_010--Hb_000412_090 Hb_086002_010 Hb_086002_010 Hb_134932_010--Hb_086002_010 Hb_001556_020 Hb_001556_020 Hb_134932_010--Hb_001556_020 Hb_002783_140 Hb_002783_140 Hb_134932_010--Hb_002783_140 Hb_004994_190--Hb_000685_130 Hb_004994_190--Hb_000412_090 Hb_004994_190--Hb_086002_010 Hb_000340_250 Hb_000340_250 Hb_004994_190--Hb_000340_250 Hb_004994_190--Hb_001556_020 Hb_000685_130--Hb_000412_090 Hb_001515_030 Hb_001515_030 Hb_000685_130--Hb_001515_030 Hb_002045_220 Hb_002045_220 Hb_000685_130--Hb_002045_220 Hb_005569_030 Hb_005569_030 Hb_000685_130--Hb_005569_030 Hb_000412_090--Hb_001515_030 Hb_000412_090--Hb_002045_220 Hb_000412_090--Hb_005569_030 Hb_011344_140 Hb_011344_140 Hb_000412_090--Hb_011344_140 Hb_007420_010 Hb_007420_010 Hb_000412_090--Hb_007420_010 Hb_000061_100 Hb_000061_100 Hb_086002_010--Hb_000061_100 Hb_002475_010 Hb_002475_010 Hb_086002_010--Hb_002475_010 Hb_006198_060 Hb_006198_060 Hb_086002_010--Hb_006198_060 Hb_000116_350 Hb_000116_350 Hb_086002_010--Hb_000116_350 Hb_086002_010--Hb_000685_130 Hb_008040_060 Hb_008040_060 Hb_086002_010--Hb_008040_060 Hb_000417_410 Hb_000417_410 Hb_001556_020--Hb_000417_410 Hb_000453_280 Hb_000453_280 Hb_001556_020--Hb_000453_280 Hb_000522_010 Hb_000522_010 Hb_001556_020--Hb_000522_010 Hb_001556_020--Hb_002783_140 Hb_003517_100 Hb_003517_100 Hb_001556_020--Hb_003517_100 Hb_000027_100 Hb_000027_100 Hb_001556_020--Hb_000027_100 Hb_001357_060 Hb_001357_060 Hb_002783_140--Hb_001357_060 Hb_002890_320 Hb_002890_320 Hb_002783_140--Hb_002890_320 Hb_033153_040 Hb_033153_040 Hb_002783_140--Hb_033153_040 Hb_002783_140--Hb_005569_030 Hb_003387_080 Hb_003387_080 Hb_002783_140--Hb_003387_080 Hb_073171_050 Hb_073171_050 Hb_002783_140--Hb_073171_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.74141 0.283293 0.209287 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.154734 0 0 0.172997 0.362299

CAGE analysis