Hb_134956_010

Information

Type -
Description -
Location Contig134956: 65-1964
Sequence    

Annotation

kegg
ID mdm:103455798
description (S)-coclaurine N-methyltransferase-like
nr
ID XP_012077230.1
description PREDICTED: (S)-coclaurine N-methyltransferase [Jatropha curcas]
swissprot
ID Q5C9L6
description (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1
trembl
ID A0A067KCV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07632 PE=4 SV=1
Gene Ontology
ID GO:0008168
description #NAME?

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134956_010 0.0 - - PREDICTED: (S)-coclaurine N-methyltransferase [Jatropha curcas]
2 Hb_003297_020 0.1837383315 - - unknown [Populus trichocarpa x Populus deltoides]
3 Hb_070385_010 0.1881599498 - - PREDICTED: uncharacterized protein LOC103323653 [Prunus mume]
4 Hb_002249_110 0.232319529 - - PREDICTED: centromere protein S isoform X1 [Jatropha curcas]
5 Hb_088428_010 0.237464177 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
6 Hb_089971_010 0.2384091568 - - PREDICTED: (S)-coclaurine N-methyltransferase [Cucumis sativus]
7 Hb_077211_010 0.2387205514 - - PREDICTED: lariat debranching enzyme-like [Jatropha curcas]
8 Hb_130134_030 0.2444289898 transcription factor TF Family: C3H hypothetical protein JCGZ_14472 [Jatropha curcas]
9 Hb_071923_010 0.2458087549 - - -
10 Hb_001767_120 0.2529617333 - - -
11 Hb_027295_040 0.2536288644 - - hypothetical protein MIMGU_mgv1a017500mg [Erythranthe guttata]
12 Hb_088774_010 0.2549990587 - - -
13 Hb_001385_090 0.2587267121 - - PREDICTED: uncharacterized protein LOC105644404 isoform X2 [Jatropha curcas]
14 Hb_121467_010 0.2650562674 - - tubulin-specific chaperone E, putative [Ricinus communis]
15 Hb_115578_010 0.2680499089 - - PREDICTED: prefoldin subunit 1-like [Populus euphratica]
16 Hb_095831_010 0.2683113282 - - PREDICTED: uncharacterized protein LOC104884649 [Beta vulgaris subsp. vulgaris]
17 Hb_130134_020 0.270174854 - - -
18 Hb_000429_250 0.2749952311 - - hypothetical protein L484_000744 [Morus notabilis]
19 Hb_006960_030 0.2764718286 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44-like [Jatropha curcas]
20 Hb_004994_340 0.2771524199 - - -

Gene co-expression network

sample Hb_134956_010 Hb_134956_010 Hb_003297_020 Hb_003297_020 Hb_134956_010--Hb_003297_020 Hb_070385_010 Hb_070385_010 Hb_134956_010--Hb_070385_010 Hb_002249_110 Hb_002249_110 Hb_134956_010--Hb_002249_110 Hb_088428_010 Hb_088428_010 Hb_134956_010--Hb_088428_010 Hb_089971_010 Hb_089971_010 Hb_134956_010--Hb_089971_010 Hb_077211_010 Hb_077211_010 Hb_134956_010--Hb_077211_010 Hb_003297_020--Hb_070385_010 Hb_007136_020 Hb_007136_020 Hb_003297_020--Hb_007136_020 Hb_101020_010 Hb_101020_010 Hb_003297_020--Hb_101020_010 Hb_003297_020--Hb_002249_110 Hb_124961_010 Hb_124961_010 Hb_003297_020--Hb_124961_010 Hb_001767_120 Hb_001767_120 Hb_003297_020--Hb_001767_120 Hb_070385_010--Hb_002249_110 Hb_130134_030 Hb_130134_030 Hb_070385_010--Hb_130134_030 Hb_070385_010--Hb_088428_010 Hb_130134_020 Hb_130134_020 Hb_070385_010--Hb_130134_020 Hb_000295_090 Hb_000295_090 Hb_002249_110--Hb_000295_090 Hb_071923_010 Hb_071923_010 Hb_002249_110--Hb_071923_010 Hb_115578_010 Hb_115578_010 Hb_002249_110--Hb_115578_010 Hb_001385_090 Hb_001385_090 Hb_002249_110--Hb_001385_090 Hb_121467_010 Hb_121467_010 Hb_088428_010--Hb_121467_010 Hb_142751_010 Hb_142751_010 Hb_088428_010--Hb_142751_010 Hb_178041_010 Hb_178041_010 Hb_088428_010--Hb_178041_010 Hb_088428_010--Hb_130134_030 Hb_009119_030 Hb_009119_030 Hb_088428_010--Hb_009119_030 Hb_000486_060 Hb_000486_060 Hb_088428_010--Hb_000486_060 Hb_089971_010--Hb_070385_010 Hb_089971_010--Hb_101020_010 Hb_000252_090 Hb_000252_090 Hb_089971_010--Hb_000252_090 Hb_000329_420 Hb_000329_420 Hb_089971_010--Hb_000329_420 Hb_000215_260 Hb_000215_260 Hb_089971_010--Hb_000215_260 Hb_077211_010--Hb_130134_030 Hb_183980_010 Hb_183980_010 Hb_077211_010--Hb_183980_010 Hb_007137_060 Hb_007137_060 Hb_077211_010--Hb_007137_060 Hb_006960_030 Hb_006960_030 Hb_077211_010--Hb_006960_030 Hb_077211_010--Hb_003297_020 Hb_001935_190 Hb_001935_190 Hb_077211_010--Hb_001935_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.446548 0 0.478237 0.446126 0.676362 2.2203
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.11864 0.0932981 0.085096 0.0376445 0

CAGE analysis