Hb_135121_010

Information

Type -
Description -
Location Contig135121: 11953-12183
Sequence    

Annotation

kegg
ID cmo:103488752
description uncharacterized LOC103488752
nr
ID XP_012073999.1
description PREDICTED: uncharacterized protein LOC105635544 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A0A0KRY6
description Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175840 PE=4 SV=1
Gene Ontology
ID GO:0005886
description PREDICTED: uncharacterized protein LOC105635544

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09867: 11894-12177
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135121_010 0.0 - - PREDICTED: uncharacterized protein LOC105635544 [Jatropha curcas]
2 Hb_000506_050 0.1374107546 - - PREDICTED: thymidine kinase [Jatropha curcas]
3 Hb_000853_250 0.1396102379 - - Cellulose synthase A catalytic subunit 3 [UDP-forming], putative [Ricinus communis]
4 Hb_004055_090 0.14428377 - - PREDICTED: protein IQ-DOMAIN 1 [Jatropha curcas]
5 Hb_002276_250 0.1451364408 - - PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X2 [Jatropha curcas]
6 Hb_003754_020 0.1524288277 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_149882_010 0.1583687296 - - PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica]
8 Hb_004357_030 0.1635578054 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
9 Hb_000805_270 0.1641804867 - - PREDICTED: expansin-A4 [Gossypium raimondii]
10 Hb_000093_090 0.1662241708 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
11 Hb_000017_250 0.1682628956 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
12 Hb_007684_010 0.1693209824 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005253_020 0.1730694376 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
14 Hb_000062_280 0.1745605906 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]
15 Hb_004330_040 0.1787342213 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000103_330 0.1798068897 - - PREDICTED: meiotic recombination protein DMC1 homolog isoform X1 [Glycine max]
17 Hb_001473_060 0.1804147005 - - PREDICTED: gibberellin 2-beta-dioxygenase 8 [Jatropha curcas]
18 Hb_001616_100 0.1813148638 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
19 Hb_000339_050 0.1813845845 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
20 Hb_001052_020 0.1822127797 - - hypothetical protein JCGZ_26487 [Jatropha curcas]

Gene co-expression network

sample Hb_135121_010 Hb_135121_010 Hb_000506_050 Hb_000506_050 Hb_135121_010--Hb_000506_050 Hb_000853_250 Hb_000853_250 Hb_135121_010--Hb_000853_250 Hb_004055_090 Hb_004055_090 Hb_135121_010--Hb_004055_090 Hb_002276_250 Hb_002276_250 Hb_135121_010--Hb_002276_250 Hb_003754_020 Hb_003754_020 Hb_135121_010--Hb_003754_020 Hb_149882_010 Hb_149882_010 Hb_135121_010--Hb_149882_010 Hb_000157_020 Hb_000157_020 Hb_000506_050--Hb_000157_020 Hb_000339_050 Hb_000339_050 Hb_000506_050--Hb_000339_050 Hb_165110_010 Hb_165110_010 Hb_000506_050--Hb_165110_010 Hb_000805_270 Hb_000805_270 Hb_000506_050--Hb_000805_270 Hb_000062_280 Hb_000062_280 Hb_000506_050--Hb_000062_280 Hb_004357_030 Hb_004357_030 Hb_000506_050--Hb_004357_030 Hb_001141_440 Hb_001141_440 Hb_000853_250--Hb_001141_440 Hb_000853_250--Hb_000062_280 Hb_000853_250--Hb_004055_090 Hb_000162_190 Hb_000162_190 Hb_000853_250--Hb_000162_190 Hb_000017_250 Hb_000017_250 Hb_000853_250--Hb_000017_250 Hb_025787_020 Hb_025787_020 Hb_000853_250--Hb_025787_020 Hb_000522_160 Hb_000522_160 Hb_004055_090--Hb_000522_160 Hb_004055_090--Hb_003754_020 Hb_000345_230 Hb_000345_230 Hb_004055_090--Hb_000345_230 Hb_004055_090--Hb_002276_250 Hb_000977_190 Hb_000977_190 Hb_004055_090--Hb_000977_190 Hb_002276_250--Hb_003754_020 Hb_000431_100 Hb_000431_100 Hb_002276_250--Hb_000431_100 Hb_002276_250--Hb_000805_270 Hb_000490_040 Hb_000490_040 Hb_002276_250--Hb_000490_040 Hb_000046_240 Hb_000046_240 Hb_002276_250--Hb_000046_240 Hb_004330_040 Hb_004330_040 Hb_003754_020--Hb_004330_040 Hb_001473_060 Hb_001473_060 Hb_003754_020--Hb_001473_060 Hb_032260_060 Hb_032260_060 Hb_003754_020--Hb_032260_060 Hb_003754_020--Hb_004357_030 Hb_002224_020 Hb_002224_020 Hb_149882_010--Hb_002224_020 Hb_127839_010 Hb_127839_010 Hb_149882_010--Hb_127839_010 Hb_087992_010 Hb_087992_010 Hb_149882_010--Hb_087992_010 Hb_003427_030 Hb_003427_030 Hb_149882_010--Hb_003427_030 Hb_000563_470 Hb_000563_470 Hb_149882_010--Hb_000563_470 Hb_000185_180 Hb_000185_180 Hb_149882_010--Hb_000185_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 24.8208 48.7161 0.782431 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.817033 0.651845 0 14.1087 6.642

CAGE analysis