Hb_135585_010

Information

Type -
Description -
Location Contig135585: 57-161
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135585_010 0.0 - - -
2 Hb_053373_010 0.1643015885 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
3 Hb_128524_010 0.1775034321 - - PREDICTED: polyadenylate-binding protein 7 isoform X1 [Jatropha curcas]
4 Hb_005834_030 0.1793764649 - - -
5 Hb_001105_080 0.181049754 - - -
6 Hb_005396_140 0.1820808421 - - -
7 Hb_140618_010 0.1825797551 - - -
8 Hb_001241_090 0.1825864055 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
9 Hb_052600_010 0.1826112261 - - -
10 Hb_003675_010 0.1826234049 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
11 Hb_000270_820 0.1850261817 - - -
12 Hb_000264_130 0.189888681 - - PREDICTED: uncharacterized protein LOC103870402 [Brassica rapa]
13 Hb_002245_040 0.2002617287 - - thioredoxin h [Hevea brasiliensis]
14 Hb_000510_380 0.2043685017 - - -
15 Hb_000482_130 0.2043708341 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
16 Hb_012543_020 0.2043729129 - - -
17 Hb_185616_010 0.2043762474 - - Ran GTPase binding protein, putative [Ricinus communis]
18 Hb_061463_010 0.2043940331 - - Cucumisin precursor, putative [Ricinus communis]
19 Hb_002130_010 0.204400179 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
20 Hb_000098_160 0.2044309384 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_135585_010 Hb_135585_010 Hb_053373_010 Hb_053373_010 Hb_135585_010--Hb_053373_010 Hb_128524_010 Hb_128524_010 Hb_135585_010--Hb_128524_010 Hb_005834_030 Hb_005834_030 Hb_135585_010--Hb_005834_030 Hb_001105_080 Hb_001105_080 Hb_135585_010--Hb_001105_080 Hb_005396_140 Hb_005396_140 Hb_135585_010--Hb_005396_140 Hb_140618_010 Hb_140618_010 Hb_135585_010--Hb_140618_010 Hb_000130_030 Hb_000130_030 Hb_053373_010--Hb_000130_030 Hb_053373_010--Hb_128524_010 Hb_028285_030 Hb_028285_030 Hb_053373_010--Hb_028285_030 Hb_000001_120 Hb_000001_120 Hb_053373_010--Hb_000001_120 Hb_002780_050 Hb_002780_050 Hb_053373_010--Hb_002780_050 Hb_128524_010--Hb_028285_030 Hb_002245_040 Hb_002245_040 Hb_128524_010--Hb_002245_040 Hb_000792_120 Hb_000792_120 Hb_128524_010--Hb_000792_120 Hb_000453_300 Hb_000453_300 Hb_128524_010--Hb_000453_300 Hb_003675_010 Hb_003675_010 Hb_005834_030--Hb_003675_010 Hb_000270_820 Hb_000270_820 Hb_005834_030--Hb_000270_820 Hb_005834_030--Hb_001105_080 Hb_005834_030--Hb_005396_140 Hb_005834_030--Hb_140618_010 Hb_001241_090 Hb_001241_090 Hb_005834_030--Hb_001241_090 Hb_001105_080--Hb_005396_140 Hb_001105_080--Hb_140618_010 Hb_001105_080--Hb_001241_090 Hb_052600_010 Hb_052600_010 Hb_001105_080--Hb_052600_010 Hb_001105_080--Hb_003675_010 Hb_005396_140--Hb_140618_010 Hb_005396_140--Hb_001241_090 Hb_005396_140--Hb_052600_010 Hb_005396_140--Hb_003675_010 Hb_140618_010--Hb_001241_090 Hb_140618_010--Hb_052600_010 Hb_140618_010--Hb_003675_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10473.5 5028.4 1030 0 0

CAGE analysis