Hb_135592_010

Information

Type -
Description -
Location Contig135592: 2-295
Sequence    

Annotation

kegg
ID rcu:RCOM_0962050
description hypothetical protein
nr
ID XP_002524345.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID F4I1H5
description Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1
trembl
ID B9SEC6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0962050 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135592_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000141_050 0.0983897798 - - hypothetical protein POPTR_0001s00460g [Populus trichocarpa]
3 Hb_013394_110 0.101923022 - - zinc finger protein, putative [Ricinus communis]
4 Hb_012675_010 0.1051012623 - - zinc finger protein, putative [Ricinus communis]
5 Hb_087717_010 0.112173109 - - hypothetical protein JCGZ_01246 [Jatropha curcas]
6 Hb_005666_010 0.1161142545 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
7 Hb_188742_010 0.1167221799 - - hypothetical protein POPTR_0019s12290g [Populus trichocarpa]
8 Hb_000733_140 0.1169652702 - - PREDICTED: ras-related protein Rab2BV-like [Jatropha curcas]
9 Hb_001689_060 0.1169680128 - - PREDICTED: uncharacterized protein LOC103846154 [Brassica rapa]
10 Hb_001343_070 0.1170483524 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like [Jatropha curcas]
11 Hb_002909_030 0.1170554887 transcription factor TF Family: C2H2 hypothetical protein RCOM_1270600 [Ricinus communis]
12 Hb_002918_100 0.1170797718 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
13 Hb_000032_110 0.117085162 - - nadhp hc toxin reductase, putative [Ricinus communis]
14 Hb_023930_010 0.1171841925 - - hypothetical protein RCOM_0641040 [Ricinus communis]
15 Hb_184500_020 0.1172487599 - - -
16 Hb_053709_020 0.1172558891 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
17 Hb_001545_090 0.1173326222 - - PREDICTED: uncharacterized protein LOC103874823 [Brassica rapa]
18 Hb_000039_130 0.1174099845 - - -
19 Hb_000494_140 0.1176123773 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
20 Hb_000235_020 0.1177107849 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_135592_010 Hb_135592_010 Hb_000141_050 Hb_000141_050 Hb_135592_010--Hb_000141_050 Hb_013394_110 Hb_013394_110 Hb_135592_010--Hb_013394_110 Hb_012675_010 Hb_012675_010 Hb_135592_010--Hb_012675_010 Hb_087717_010 Hb_087717_010 Hb_135592_010--Hb_087717_010 Hb_005666_010 Hb_005666_010 Hb_135592_010--Hb_005666_010 Hb_188742_010 Hb_188742_010 Hb_135592_010--Hb_188742_010 Hb_000141_050--Hb_012675_010 Hb_000733_140 Hb_000733_140 Hb_000141_050--Hb_000733_140 Hb_001343_070 Hb_001343_070 Hb_000141_050--Hb_001343_070 Hb_002909_030 Hb_002909_030 Hb_000141_050--Hb_002909_030 Hb_001689_060 Hb_001689_060 Hb_000141_050--Hb_001689_060 Hb_002918_100 Hb_002918_100 Hb_000141_050--Hb_002918_100 Hb_005858_010 Hb_005858_010 Hb_013394_110--Hb_005858_010 Hb_012758_020 Hb_012758_020 Hb_013394_110--Hb_012758_020 Hb_000245_010 Hb_000245_010 Hb_013394_110--Hb_000245_010 Hb_002383_010 Hb_002383_010 Hb_013394_110--Hb_002383_010 Hb_000005_150 Hb_000005_150 Hb_013394_110--Hb_000005_150 Hb_001414_070 Hb_001414_070 Hb_013394_110--Hb_001414_070 Hb_164853_010 Hb_164853_010 Hb_012675_010--Hb_164853_010 Hb_003420_010 Hb_003420_010 Hb_012675_010--Hb_003420_010 Hb_012675_010--Hb_188742_010 Hb_001158_210 Hb_001158_210 Hb_012675_010--Hb_001158_210 Hb_128935_010 Hb_128935_010 Hb_012675_010--Hb_128935_010 Hb_002078_070 Hb_002078_070 Hb_087717_010--Hb_002078_070 Hb_087717_010--Hb_013394_110 Hb_004724_280 Hb_004724_280 Hb_087717_010--Hb_004724_280 Hb_087717_010--Hb_164853_010 Hb_087717_010--Hb_003420_010 Hb_087717_010--Hb_012675_010 Hb_000815_010 Hb_000815_010 Hb_005666_010--Hb_000815_010 Hb_000742_040 Hb_000742_040 Hb_005666_010--Hb_000742_040 Hb_007317_050 Hb_007317_050 Hb_005666_010--Hb_007317_050 Hb_005666_010--Hb_164853_010 Hb_005666_010--Hb_012675_010 Hb_016734_110 Hb_016734_110 Hb_005666_010--Hb_016734_110 Hb_026196_020 Hb_026196_020 Hb_188742_010--Hb_026196_020 Hb_124677_070 Hb_124677_070 Hb_188742_010--Hb_124677_070 Hb_188742_010--Hb_000141_050 Hb_000896_030 Hb_000896_030 Hb_188742_010--Hb_000896_030 Hb_188742_010--Hb_000742_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.698224 16.6946 41.7387 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.310584 0 0.144455 0.473847

CAGE analysis