Hb_135810_010

Information

Type -
Description -
Location Contig135810: 1421-1888
Sequence    

Annotation

kegg
ID rcu:RCOM_1733320
description hypothetical protein
nr
ID XP_012065096.1
description PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
swissprot
ID Q9SJI7
description Phospholipase A1-IIdelta OS=Arabidopsis thaliana GN=At2g42690 PE=1 SV=1
trembl
ID A0A067LIA3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22119 PE=4 SV=1
Gene Ontology
ID GO:0009507
description phospholipase a1-iidelta

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135810_010 0.0 - - PREDICTED: phospholipase A1-IIdelta [Jatropha curcas]
2 Hb_002716_150 0.0999420134 - - starch synthase isoform I [Manihot esculenta]
3 Hb_002027_220 0.1128124517 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
4 Hb_000258_080 0.118675627 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
5 Hb_031042_040 0.1275383281 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT4 [Jatropha curcas]
6 Hb_011282_030 0.1352820341 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
7 Hb_000529_160 0.1424770241 - - PREDICTED: uncharacterized protein At1g04910 [Populus euphratica]
8 Hb_005918_040 0.1456071415 - - hypothetical protein POPTR_0003s04560g [Populus trichocarpa]
9 Hb_014568_030 0.1492616845 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
10 Hb_000031_030 0.1503709584 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]
11 Hb_003106_010 0.1509840815 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
12 Hb_007064_040 0.1515225634 - - hypothetical protein RCOM_0254640 [Ricinus communis]
13 Hb_001268_210 0.154324141 - - zinc finger protein, putative [Ricinus communis]
14 Hb_000120_240 0.1565727364 - - PREDICTED: uncharacterized protein LOC105630166 [Jatropha curcas]
15 Hb_005739_010 0.1569120927 - - hypothetical protein JCGZ_04016 [Jatropha curcas]
16 Hb_000236_250 0.1591638715 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010174_130 0.1591769287 - - PREDICTED: regulator of G-protein signaling 1 [Jatropha curcas]
18 Hb_000836_630 0.1598920067 - - PREDICTED: WD repeat-containing protein 44 [Jatropha curcas]
19 Hb_000761_020 0.1607536041 - - PREDICTED: uncharacterized protein LOC105638198 [Jatropha curcas]
20 Hb_001846_060 0.1611820743 - - hypothetical protein RCOM_0992860 [Ricinus communis]

Gene co-expression network

sample Hb_135810_010 Hb_135810_010 Hb_002716_150 Hb_002716_150 Hb_135810_010--Hb_002716_150 Hb_002027_220 Hb_002027_220 Hb_135810_010--Hb_002027_220 Hb_000258_080 Hb_000258_080 Hb_135810_010--Hb_000258_080 Hb_031042_040 Hb_031042_040 Hb_135810_010--Hb_031042_040 Hb_011282_030 Hb_011282_030 Hb_135810_010--Hb_011282_030 Hb_000529_160 Hb_000529_160 Hb_135810_010--Hb_000529_160 Hb_014568_030 Hb_014568_030 Hb_002716_150--Hb_014568_030 Hb_001855_010 Hb_001855_010 Hb_002716_150--Hb_001855_010 Hb_002716_150--Hb_031042_040 Hb_003055_050 Hb_003055_050 Hb_002716_150--Hb_003055_050 Hb_003376_100 Hb_003376_100 Hb_002716_150--Hb_003376_100 Hb_001268_210 Hb_001268_210 Hb_002027_220--Hb_001268_210 Hb_000120_240 Hb_000120_240 Hb_002027_220--Hb_000120_240 Hb_012977_010 Hb_012977_010 Hb_002027_220--Hb_012977_010 Hb_012390_010 Hb_012390_010 Hb_002027_220--Hb_012390_010 Hb_003654_010 Hb_003654_010 Hb_002027_220--Hb_003654_010 Hb_000258_080--Hb_012390_010 Hb_000258_430 Hb_000258_430 Hb_000258_080--Hb_000258_430 Hb_005167_040 Hb_005167_040 Hb_000258_080--Hb_005167_040 Hb_057183_040 Hb_057183_040 Hb_000258_080--Hb_057183_040 Hb_000031_030 Hb_000031_030 Hb_000258_080--Hb_000031_030 Hb_002955_030 Hb_002955_030 Hb_031042_040--Hb_002955_030 Hb_010174_130 Hb_010174_130 Hb_031042_040--Hb_010174_130 Hb_002377_040 Hb_002377_040 Hb_031042_040--Hb_002377_040 Hb_000085_340 Hb_000085_340 Hb_031042_040--Hb_000085_340 Hb_000034_140 Hb_000034_140 Hb_031042_040--Hb_000034_140 Hb_001584_110 Hb_001584_110 Hb_011282_030--Hb_001584_110 Hb_000230_330 Hb_000230_330 Hb_011282_030--Hb_000230_330 Hb_011282_030--Hb_014568_030 Hb_022256_040 Hb_022256_040 Hb_011282_030--Hb_022256_040 Hb_000462_150 Hb_000462_150 Hb_011282_030--Hb_000462_150 Hb_010222_030 Hb_010222_030 Hb_011282_030--Hb_010222_030 Hb_000365_310 Hb_000365_310 Hb_000529_160--Hb_000365_310 Hb_000299_040 Hb_000299_040 Hb_000529_160--Hb_000299_040 Hb_010120_030 Hb_010120_030 Hb_000529_160--Hb_010120_030 Hb_000179_170 Hb_000179_170 Hb_000529_160--Hb_000179_170 Hb_076787_010 Hb_076787_010 Hb_000529_160--Hb_076787_010 Hb_022137_060 Hb_022137_060 Hb_000529_160--Hb_022137_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
563.52 30.0799 43.9196 206.477 345.761 442.223
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
303.507 103.775 296.802 33.8217 129.202

CAGE analysis