Hb_135959_010

Information

Type -
Description -
Location Contig135959: 881-1595
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023178mg
description hypothetical protein
nr
ID KDP33489.1
description hypothetical protein JCGZ_07060 [Jatropha curcas]
swissprot
ID Q8S944
description Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2
trembl
ID A0A067KNV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07060 PE=4 SV=1
Gene Ontology
ID GO:0003924
description dynamin-related protein 3a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135959_010 0.0 - - hypothetical protein JCGZ_07060 [Jatropha curcas]
2 Hb_002851_010 0.0547490636 - - sugar transporter, putative [Ricinus communis]
3 Hb_000157_070 0.0702356906 - - PREDICTED: alpha-N-acetylglucosaminidase [Jatropha curcas]
4 Hb_020805_180 0.0815455818 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
5 Hb_158845_060 0.0909928783 - - PREDICTED: nudix hydrolase 3 isoform X1 [Jatropha curcas]
6 Hb_002027_190 0.0929019455 - - PREDICTED: autophagy-related protein 18g [Jatropha curcas]
7 Hb_007747_170 0.0932377189 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
8 Hb_000834_230 0.0934453599 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
9 Hb_003058_200 0.0940292267 - - PREDICTED: dihydropyrimidinase [Populus euphratica]
10 Hb_080147_050 0.0941681788 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
11 Hb_000243_300 0.0952081323 - - catalytic, putative [Ricinus communis]
12 Hb_103688_010 0.0956001105 - - PREDICTED: sucrose-phosphatase 2-like [Jatropha curcas]
13 Hb_006829_100 0.098281648 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000580_050 0.1004656894 - - -
15 Hb_000321_090 0.1006008762 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Jatropha curcas]
16 Hb_001085_080 0.1014177668 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
17 Hb_001587_030 0.1045646075 - - hypothetical protein JCGZ_09892 [Jatropha curcas]
18 Hb_001322_180 0.1057378289 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 26 [Jatropha curcas]
19 Hb_000649_060 0.1059007763 - - PREDICTED: E3 ubiquitin protein ligase RIE1 [Jatropha curcas]
20 Hb_000849_080 0.1064014494 - - PREDICTED: monocopper oxidase-like protein SKU5 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_135959_010 Hb_135959_010 Hb_002851_010 Hb_002851_010 Hb_135959_010--Hb_002851_010 Hb_000157_070 Hb_000157_070 Hb_135959_010--Hb_000157_070 Hb_020805_180 Hb_020805_180 Hb_135959_010--Hb_020805_180 Hb_158845_060 Hb_158845_060 Hb_135959_010--Hb_158845_060 Hb_002027_190 Hb_002027_190 Hb_135959_010--Hb_002027_190 Hb_007747_170 Hb_007747_170 Hb_135959_010--Hb_007747_170 Hb_002851_010--Hb_002027_190 Hb_002851_010--Hb_020805_180 Hb_002851_010--Hb_000157_070 Hb_000649_060 Hb_000649_060 Hb_002851_010--Hb_000649_060 Hb_003058_200 Hb_003058_200 Hb_002851_010--Hb_003058_200 Hb_000157_070--Hb_020805_180 Hb_080147_050 Hb_080147_050 Hb_000157_070--Hb_080147_050 Hb_000342_050 Hb_000342_050 Hb_000157_070--Hb_000342_050 Hb_003626_050 Hb_003626_050 Hb_000157_070--Hb_003626_050 Hb_020805_180--Hb_080147_050 Hb_000321_090 Hb_000321_090 Hb_020805_180--Hb_000321_090 Hb_020805_180--Hb_000649_060 Hb_020805_180--Hb_002027_190 Hb_003964_110 Hb_003964_110 Hb_158845_060--Hb_003964_110 Hb_000599_360 Hb_000599_360 Hb_158845_060--Hb_000599_360 Hb_000297_030 Hb_000297_030 Hb_158845_060--Hb_000297_030 Hb_158845_060--Hb_080147_050 Hb_001085_080 Hb_001085_080 Hb_158845_060--Hb_001085_080 Hb_021977_010 Hb_021977_010 Hb_158845_060--Hb_021977_010 Hb_002027_190--Hb_000321_090 Hb_000080_110 Hb_000080_110 Hb_002027_190--Hb_000080_110 Hb_033799_010 Hb_033799_010 Hb_002027_190--Hb_033799_010 Hb_002027_190--Hb_007747_170 Hb_019840_030 Hb_019840_030 Hb_007747_170--Hb_019840_030 Hb_004450_070 Hb_004450_070 Hb_007747_170--Hb_004450_070 Hb_000608_230 Hb_000608_230 Hb_007747_170--Hb_000608_230 Hb_007245_020 Hb_007245_020 Hb_007747_170--Hb_007245_020 Hb_000331_580 Hb_000331_580 Hb_007747_170--Hb_000331_580
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.26482 4.66462 3.32234 5.83642 3.04581 3.11142
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.63208 1.19082 1.10457 7.7872 4.18501

CAGE analysis