Hb_136509_010

Information

Type -
Description -
Location Contig136509: 882-1202
Sequence    

Annotation

kegg
ID rcu:RCOM_1615180
description calmodulin-binding heat-shock protein, putative
nr
ID XP_002511853.1
description calmodulin-binding heat-shock protein, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RDR4
description Calmodulin-binding heat-shock protein, putative OS=Ricinus communis GN=RCOM_1615180 PE=4 SV=1
Gene Ontology
ID GO:0016787
description lipase class 3 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136509_010 0.0 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
2 Hb_002217_020 0.0899443101 - - PREDICTED: uncharacterized protein LOC105643601 isoform X1 [Jatropha curcas]
3 Hb_001159_110 0.0911849511 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
4 Hb_005545_100 0.0992023098 - - PREDICTED: uncharacterized protein LOC105645673 isoform X1 [Jatropha curcas]
5 Hb_004453_050 0.1005983649 - - PREDICTED: uncharacterized protein LOC105637675 [Jatropha curcas]
6 Hb_001633_210 0.1008280093 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
7 Hb_003349_090 0.1057200208 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
8 Hb_000230_390 0.1062745401 - - PREDICTED: F-box/kelch-repeat protein At3g23880 [Jatropha curcas]
9 Hb_000840_250 0.1063863661 - - PREDICTED: autophagy-related protein 13 [Jatropha curcas]
10 Hb_022250_060 0.1092358897 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like isoform X1 [Jatropha curcas]
11 Hb_008226_060 0.1105305576 - - PREDICTED: folic acid synthesis protein fol1-like [Jatropha curcas]
12 Hb_010812_120 0.1114821193 - - hypothetical protein JCGZ_03293 [Jatropha curcas]
13 Hb_009178_030 0.1117287821 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000614_250 0.1119726807 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
15 Hb_000915_090 0.1128730754 - - PREDICTED: transcription initiation factor TFIID subunit 14b [Jatropha curcas]
16 Hb_000926_090 0.1144051558 - - PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Jatropha curcas]
17 Hb_003211_020 0.1146936663 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Jatropha curcas]
18 Hb_008173_110 0.1188888418 - - DNA binding protein, putative [Ricinus communis]
19 Hb_008725_260 0.1190067809 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
20 Hb_022256_020 0.1195831004 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_136509_010 Hb_136509_010 Hb_002217_020 Hb_002217_020 Hb_136509_010--Hb_002217_020 Hb_001159_110 Hb_001159_110 Hb_136509_010--Hb_001159_110 Hb_005545_100 Hb_005545_100 Hb_136509_010--Hb_005545_100 Hb_004453_050 Hb_004453_050 Hb_136509_010--Hb_004453_050 Hb_001633_210 Hb_001633_210 Hb_136509_010--Hb_001633_210 Hb_003349_090 Hb_003349_090 Hb_136509_010--Hb_003349_090 Hb_022250_060 Hb_022250_060 Hb_002217_020--Hb_022250_060 Hb_007317_010 Hb_007317_010 Hb_002217_020--Hb_007317_010 Hb_003657_010 Hb_003657_010 Hb_002217_020--Hb_003657_010 Hb_001856_200 Hb_001856_200 Hb_002217_020--Hb_001856_200 Hb_000164_020 Hb_000164_020 Hb_002217_020--Hb_000164_020 Hb_000230_390 Hb_000230_390 Hb_001159_110--Hb_000230_390 Hb_005074_030 Hb_005074_030 Hb_001159_110--Hb_005074_030 Hb_000614_250 Hb_000614_250 Hb_001159_110--Hb_000614_250 Hb_001159_110--Hb_004453_050 Hb_000430_020 Hb_000430_020 Hb_001159_110--Hb_000430_020 Hb_007508_090 Hb_007508_090 Hb_001159_110--Hb_007508_090 Hb_001504_330 Hb_001504_330 Hb_005545_100--Hb_001504_330 Hb_002284_200 Hb_002284_200 Hb_005545_100--Hb_002284_200 Hb_008566_050 Hb_008566_050 Hb_005545_100--Hb_008566_050 Hb_005545_100--Hb_022250_060 Hb_005545_100--Hb_002217_020 Hb_004453_050--Hb_001633_210 Hb_007416_320 Hb_007416_320 Hb_004453_050--Hb_007416_320 Hb_000120_470 Hb_000120_470 Hb_004453_050--Hb_000120_470 Hb_004453_050--Hb_000614_250 Hb_008173_110 Hb_008173_110 Hb_004453_050--Hb_008173_110 Hb_001545_170 Hb_001545_170 Hb_004453_050--Hb_001545_170 Hb_000250_060 Hb_000250_060 Hb_001633_210--Hb_000250_060 Hb_000840_250 Hb_000840_250 Hb_001633_210--Hb_000840_250 Hb_010812_120 Hb_010812_120 Hb_001633_210--Hb_010812_120 Hb_001633_210--Hb_000614_250 Hb_000185_030 Hb_000185_030 Hb_001633_210--Hb_000185_030 Hb_000297_010 Hb_000297_010 Hb_001633_210--Hb_000297_010 Hb_003349_090--Hb_010812_120 Hb_004837_160 Hb_004837_160 Hb_003349_090--Hb_004837_160 Hb_028515_010 Hb_028515_010 Hb_003349_090--Hb_028515_010 Hb_000373_130 Hb_000373_130 Hb_003349_090--Hb_000373_130 Hb_004889_010 Hb_004889_010 Hb_003349_090--Hb_004889_010 Hb_089032_030 Hb_089032_030 Hb_003349_090--Hb_089032_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.626 11.0179 7.7824 6.34473 2.6387 9.20547
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.84278 12.7385 15.0594 7.65001 4.00206

CAGE analysis