Hb_136765_010

Information

Type -
Description -
Location Contig136765: 2-618
Sequence    

Annotation

kegg
ID pop:POPTR_0001s08870g
description POPTRDRAFT_1067002; hypothetical protein
nr
ID XP_012086990.1
description PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K119
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20655 PE=4 SV=1
Gene Ontology
ID GO:0016021
description phosphatidylinositol glycan anchor biosynthesis class u

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136765_010 0.0 - - PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X2 [Jatropha curcas]
2 Hb_000331_500 0.1494340541 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
3 Hb_068922_010 0.1524169906 - - hypothetical protein POPTR_0005s17480g [Populus trichocarpa]
4 Hb_002141_020 0.156156616 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]
5 Hb_012867_010 0.1606883646 - - Vacuolar protein sorting 45 [Theobroma cacao]
6 Hb_010068_100 0.1827127692 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
7 Hb_004241_040 0.1846948033 - - -
8 Hb_042404_010 0.1887762753 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
9 Hb_004712_180 0.1923088206 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000253_030 0.2035325607 - - hypothetical protein JCGZ_23039 [Jatropha curcas]
11 Hb_073367_010 0.2060513727 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
12 Hb_012305_040 0.2066921289 - - PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 9A-like [Jatropha curcas]
13 Hb_004243_010 0.2095448595 - - hypothetical protein JCGZ_01580 [Jatropha curcas]
14 Hb_002045_140 0.2115091541 - - histone acetyltransferase, partial [Triticum aestivum]
15 Hb_000107_140 0.2122631038 - - -
16 Hb_008667_040 0.2198212352 - - glycerol-3-phosphate transporter family protein [Populus trichocarpa]
17 Hb_006541_090 0.2229797603 - - hypothetical protein VITISV_020777 [Vitis vinifera]
18 Hb_004662_010 0.2279578635 - - Nascent polypeptide-associated complex subunit beta [Medicago truncatula]
19 Hb_005054_070 0.2309863441 - - unnamed protein product [Vitis vinifera]
20 Hb_000622_100 0.2309933501 - - PREDICTED: pre-rRNA-processing protein RIX1-like [Jatropha curcas]

Gene co-expression network

sample Hb_136765_010 Hb_136765_010 Hb_000331_500 Hb_000331_500 Hb_136765_010--Hb_000331_500 Hb_068922_010 Hb_068922_010 Hb_136765_010--Hb_068922_010 Hb_002141_020 Hb_002141_020 Hb_136765_010--Hb_002141_020 Hb_012867_010 Hb_012867_010 Hb_136765_010--Hb_012867_010 Hb_010068_100 Hb_010068_100 Hb_136765_010--Hb_010068_100 Hb_004241_040 Hb_004241_040 Hb_136765_010--Hb_004241_040 Hb_000331_500--Hb_002141_020 Hb_000107_140 Hb_000107_140 Hb_000331_500--Hb_000107_140 Hb_003376_170 Hb_003376_170 Hb_000331_500--Hb_003376_170 Hb_004662_010 Hb_004662_010 Hb_000331_500--Hb_004662_010 Hb_042404_010 Hb_042404_010 Hb_000331_500--Hb_042404_010 Hb_068922_010--Hb_012867_010 Hb_068922_010--Hb_010068_100 Hb_012120_030 Hb_012120_030 Hb_068922_010--Hb_012120_030 Hb_000253_030 Hb_000253_030 Hb_068922_010--Hb_000253_030 Hb_005271_020 Hb_005271_020 Hb_068922_010--Hb_005271_020 Hb_002141_020--Hb_004662_010 Hb_002141_020--Hb_012867_010 Hb_004109_060 Hb_004109_060 Hb_002141_020--Hb_004109_060 Hb_002141_020--Hb_004241_040 Hb_089889_020 Hb_089889_020 Hb_012867_010--Hb_089889_020 Hb_107847_010 Hb_107847_010 Hb_012867_010--Hb_107847_010 Hb_125861_010 Hb_125861_010 Hb_012867_010--Hb_125861_010 Hb_010068_100--Hb_000253_030 Hb_006541_090 Hb_006541_090 Hb_010068_100--Hb_006541_090 Hb_082407_010 Hb_082407_010 Hb_010068_100--Hb_082407_010 Hb_008667_040 Hb_008667_040 Hb_010068_100--Hb_008667_040 Hb_032496_030 Hb_032496_030 Hb_004241_040--Hb_032496_030 Hb_073367_010 Hb_073367_010 Hb_004241_040--Hb_073367_010 Hb_000622_100 Hb_000622_100 Hb_004241_040--Hb_000622_100 Hb_025236_040 Hb_025236_040 Hb_004241_040--Hb_025236_040 Hb_005054_070 Hb_005054_070 Hb_004241_040--Hb_005054_070 Hb_004241_040--Hb_004662_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.774276 0.234484 0.390669 0.748131 1.09448 2.08486
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.30192 1.02272 0 0 0

CAGE analysis