Hb_137272_010

Information

Type -
Description -
Location Contig137272: 170-850
Sequence    

Annotation

kegg
ID rcu:RCOM_0906060
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_012091420.1
description PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
swissprot
ID Q8GYA4
description Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3
trembl
ID A0A067JAM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21283 PE=3 SV=1
Gene Ontology
ID GO:0005622
description atp binding

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137272_010 0.0 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
2 Hb_003881_020 0.0840048883 - - PREDICTED: stellacyanin-like [Jatropha curcas]
3 Hb_000567_060 0.0965827937 - - PREDICTED: U-box domain-containing protein 7 [Jatropha curcas]
4 Hb_000018_090 0.1053581889 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_006266_010 0.1093970521 - - unnamed protein product [Vitis vinifera]
6 Hb_000482_070 0.110328472 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
7 Hb_000189_160 0.117363316 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
8 Hb_000020_020 0.1197368276 - - hypothetical protein JCGZ_06491 [Jatropha curcas]
9 Hb_001918_030 0.1209350608 - - -
10 Hb_083412_010 0.122801084 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
11 Hb_014250_010 0.1246243173 - - PREDICTED: alpha-mannosidase-like isoform X2 [Populus euphratica]
12 Hb_005834_050 0.1254356867 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
13 Hb_000941_010 0.1257340444 - - hypothetical protein RCOM_0504460 [Ricinus communis]
14 Hb_002503_050 0.1270625977 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
15 Hb_000046_430 0.1274603761 - - hypothetical protein JCGZ_02013 [Jatropha curcas]
16 Hb_001634_030 0.128009887 - - Receptor like protein 1, putative [Theobroma cacao]
17 Hb_000731_280 0.1313241204 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
18 Hb_005993_030 0.1345755819 - - putative senescence-associated protein SAG102 [Populus trichocarpa]
19 Hb_068804_070 0.135192737 - - hypothetical protein JCGZ_12627 [Jatropha curcas]
20 Hb_004611_050 0.135248382 - - PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas]

Gene co-expression network

sample Hb_137272_010 Hb_137272_010 Hb_003881_020 Hb_003881_020 Hb_137272_010--Hb_003881_020 Hb_000567_060 Hb_000567_060 Hb_137272_010--Hb_000567_060 Hb_000018_090 Hb_000018_090 Hb_137272_010--Hb_000018_090 Hb_006266_010 Hb_006266_010 Hb_137272_010--Hb_006266_010 Hb_000482_070 Hb_000482_070 Hb_137272_010--Hb_000482_070 Hb_000189_160 Hb_000189_160 Hb_137272_010--Hb_000189_160 Hb_083412_010 Hb_083412_010 Hb_003881_020--Hb_083412_010 Hb_003881_020--Hb_000567_060 Hb_003881_020--Hb_000482_070 Hb_000501_110 Hb_000501_110 Hb_003881_020--Hb_000501_110 Hb_002984_040 Hb_002984_040 Hb_003881_020--Hb_002984_040 Hb_000567_060--Hb_000018_090 Hb_002871_050 Hb_002871_050 Hb_000567_060--Hb_002871_050 Hb_000567_060--Hb_000482_070 Hb_001345_020 Hb_001345_020 Hb_000567_060--Hb_001345_020 Hb_000018_090--Hb_000482_070 Hb_000018_090--Hb_002871_050 Hb_002774_180 Hb_002774_180 Hb_000018_090--Hb_002774_180 Hb_001776_130 Hb_001776_130 Hb_000018_090--Hb_001776_130 Hb_003592_060 Hb_003592_060 Hb_006266_010--Hb_003592_060 Hb_005743_010 Hb_005743_010 Hb_006266_010--Hb_005743_010 Hb_009693_010 Hb_009693_010 Hb_006266_010--Hb_009693_010 Hb_006615_220 Hb_006615_220 Hb_006266_010--Hb_006615_220 Hb_068804_070 Hb_068804_070 Hb_006266_010--Hb_068804_070 Hb_000482_070--Hb_002871_050 Hb_007747_160 Hb_007747_160 Hb_000482_070--Hb_007747_160 Hb_005679_110 Hb_005679_110 Hb_000482_070--Hb_005679_110 Hb_003224_010 Hb_003224_010 Hb_000189_160--Hb_003224_010 Hb_000046_430 Hb_000046_430 Hb_000189_160--Hb_000046_430 Hb_002503_050 Hb_002503_050 Hb_000189_160--Hb_002503_050 Hb_014250_010 Hb_014250_010 Hb_000189_160--Hb_014250_010 Hb_002601_140 Hb_002601_140 Hb_000189_160--Hb_002601_140 Hb_001135_010 Hb_001135_010 Hb_000189_160--Hb_001135_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.141148 17.176 54.039 19.7518 0 0.164278
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 26.6145 17.2797

CAGE analysis