Hb_137543_010

Information

Type -
Description -
Location Contig137543: 78-758
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137543_010 0.0 - - -
2 Hb_004534_020 0.2138922436 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
3 Hb_002609_100 0.2427972192 - - PREDICTED: uncharacterized protein LOC105133073 isoform X1 [Populus euphratica]
4 Hb_007382_040 0.2441967073 - - uncharacterized LOC105644857 [Jatropha curcas]
5 Hb_001301_190 0.2615319105 - - -
6 Hb_009355_030 0.2668435359 - - conserved hypothetical protein [Ricinus communis]
7 Hb_166786_030 0.273781077 - - PREDICTED: uncharacterized protein LOC105775425 [Gossypium raimondii]
8 Hb_010770_010 0.2740278969 - - -
9 Hb_030414_050 0.2866581474 - - -
10 Hb_007416_200 0.2899606991 - - PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Jatropha curcas]
11 Hb_003813_200 0.2914004457 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
12 Hb_001259_030 0.2979879116 - - PREDICTED: uncharacterized protein LOC105641270 [Jatropha curcas]
13 Hb_012518_060 0.3016315873 - - -
14 Hb_183510_010 0.3026358806 - - PREDICTED: RPM1-interacting protein 4-like isoform X2 [Jatropha curcas]
15 Hb_002026_230 0.3053815408 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
16 Hb_003772_080 0.3070229239 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
17 Hb_000684_300 0.3072377138 transcription factor TF Family: NF-YB hypothetical protein CICLE_v10012920mg [Citrus clementina]
18 Hb_171659_010 0.3097729043 - - PREDICTED: uncharacterized protein LOC104903214 [Beta vulgaris subsp. vulgaris]
19 Hb_001565_100 0.3100713555 - - unnamed protein product [Coffea canephora]
20 Hb_000613_020 0.310526859 - - PREDICTED: U-box domain-containing protein 15 [Jatropha curcas]

Gene co-expression network

sample Hb_137543_010 Hb_137543_010 Hb_004534_020 Hb_004534_020 Hb_137543_010--Hb_004534_020 Hb_002609_100 Hb_002609_100 Hb_137543_010--Hb_002609_100 Hb_007382_040 Hb_007382_040 Hb_137543_010--Hb_007382_040 Hb_001301_190 Hb_001301_190 Hb_137543_010--Hb_001301_190 Hb_009355_030 Hb_009355_030 Hb_137543_010--Hb_009355_030 Hb_166786_030 Hb_166786_030 Hb_137543_010--Hb_166786_030 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_004534_020--Hb_002609_100 Hb_004534_020--Hb_166786_030 Hb_012150_070 Hb_012150_070 Hb_002609_100--Hb_012150_070 Hb_002026_230 Hb_002026_230 Hb_002609_100--Hb_002026_230 Hb_002609_100--Hb_007382_040 Hb_000613_020 Hb_000613_020 Hb_002609_100--Hb_000613_020 Hb_030414_050 Hb_030414_050 Hb_002609_100--Hb_030414_050 Hb_003050_090 Hb_003050_090 Hb_002609_100--Hb_003050_090 Hb_001259_030 Hb_001259_030 Hb_007382_040--Hb_001259_030 Hb_007382_040--Hb_003050_090 Hb_007382_040--Hb_000613_020 Hb_060437_010 Hb_060437_010 Hb_007382_040--Hb_060437_010 Hb_004254_040 Hb_004254_040 Hb_007382_040--Hb_004254_040 Hb_001301_190--Hb_009355_030 Hb_000753_210 Hb_000753_210 Hb_001301_190--Hb_000753_210 Hb_003299_080 Hb_003299_080 Hb_001301_190--Hb_003299_080 Hb_183510_010 Hb_183510_010 Hb_001301_190--Hb_183510_010 Hb_001247_230 Hb_001247_230 Hb_001301_190--Hb_001247_230 Hb_000050_090 Hb_000050_090 Hb_001301_190--Hb_000050_090 Hb_009355_030--Hb_183510_010 Hb_006588_090 Hb_006588_090 Hb_009355_030--Hb_006588_090 Hb_009355_030--Hb_001247_230 Hb_000174_200 Hb_000174_200 Hb_009355_030--Hb_000174_200 Hb_000116_570 Hb_000116_570 Hb_009355_030--Hb_000116_570 Hb_002002_020 Hb_002002_020 Hb_009355_030--Hb_002002_020 Hb_001230_010 Hb_001230_010 Hb_166786_030--Hb_001230_010 Hb_001178_020 Hb_001178_020 Hb_166786_030--Hb_001178_020 Hb_002007_290 Hb_002007_290 Hb_166786_030--Hb_002007_290 Hb_166786_030--Hb_004254_040 Hb_024828_040 Hb_024828_040 Hb_166786_030--Hb_024828_040 Hb_001635_220 Hb_001635_220 Hb_166786_030--Hb_001635_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.565947 0.210746 0 0 0.178329 0.122621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.106522 0.0837104 0 0 0

CAGE analysis