Hb_138413_010

Information

Type -
Description -
Location Contig138413: 51-543
Sequence    

Annotation

kegg
ID vvi:100265010
description uncharacterized LOC100265010
nr
ID KDP36309.1
description hypothetical protein JCGZ_09524 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KWU5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09524 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138413_010 0.0 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
2 Hb_003327_060 0.0905085607 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
3 Hb_014067_010 0.0947958922 - - hypothetical protein JCGZ_09524 [Jatropha curcas]
4 Hb_000933_140 0.1147564794 - - PREDICTED: uncharacterized protein LOC105630501 [Jatropha curcas]
5 Hb_026048_090 0.117218077 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003627_020 0.1207862829 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
7 Hb_002067_160 0.1243396197 - - Protein MLO, putative [Ricinus communis]
8 Hb_004126_010 0.12448828 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
9 Hb_066807_010 0.1259808512 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
10 Hb_000853_370 0.1271242108 - - PREDICTED: uncharacterized protein LOC105642590 [Jatropha curcas]
11 Hb_004968_060 0.13098587 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009510_030 0.1335246961 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]
13 Hb_001014_220 0.1343873411 - - PREDICTED: mediator-associated protein 2 [Jatropha curcas]
14 Hb_000270_420 0.1345522749 - - actin binding protein, putative [Ricinus communis]
15 Hb_000084_310 0.1346525851 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
16 Hb_005730_020 0.1362616099 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF3.1-like [Jatropha curcas]
17 Hb_001981_070 0.1371275649 - - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, putative [Ricinus communis]
18 Hb_000571_070 0.1374933879 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
19 Hb_001476_100 0.1380247901 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001804_060 0.1382129628 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_18059 [Jatropha curcas]

Gene co-expression network

sample Hb_138413_010 Hb_138413_010 Hb_003327_060 Hb_003327_060 Hb_138413_010--Hb_003327_060 Hb_014067_010 Hb_014067_010 Hb_138413_010--Hb_014067_010 Hb_000933_140 Hb_000933_140 Hb_138413_010--Hb_000933_140 Hb_026048_090 Hb_026048_090 Hb_138413_010--Hb_026048_090 Hb_003627_020 Hb_003627_020 Hb_138413_010--Hb_003627_020 Hb_002067_160 Hb_002067_160 Hb_138413_010--Hb_002067_160 Hb_000914_060 Hb_000914_060 Hb_003327_060--Hb_000914_060 Hb_000155_070 Hb_000155_070 Hb_003327_060--Hb_000155_070 Hb_003327_060--Hb_000933_140 Hb_004968_060 Hb_004968_060 Hb_003327_060--Hb_004968_060 Hb_005730_020 Hb_005730_020 Hb_003327_060--Hb_005730_020 Hb_004126_010 Hb_004126_010 Hb_014067_010--Hb_004126_010 Hb_000249_110 Hb_000249_110 Hb_014067_010--Hb_000249_110 Hb_002843_160 Hb_002843_160 Hb_014067_010--Hb_002843_160 Hb_014067_010--Hb_005730_020 Hb_009510_030 Hb_009510_030 Hb_014067_010--Hb_009510_030 Hb_008016_010 Hb_008016_010 Hb_000933_140--Hb_008016_010 Hb_000933_140--Hb_026048_090 Hb_001437_040 Hb_001437_040 Hb_000933_140--Hb_001437_040 Hb_007992_030 Hb_007992_030 Hb_000933_140--Hb_007992_030 Hb_002518_250 Hb_002518_250 Hb_000933_140--Hb_002518_250 Hb_098709_010 Hb_098709_010 Hb_000933_140--Hb_098709_010 Hb_026048_090--Hb_009510_030 Hb_127979_010 Hb_127979_010 Hb_026048_090--Hb_127979_010 Hb_000771_140 Hb_000771_140 Hb_026048_090--Hb_000771_140 Hb_000057_060 Hb_000057_060 Hb_026048_090--Hb_000057_060 Hb_001433_170 Hb_001433_170 Hb_026048_090--Hb_001433_170 Hb_026048_090--Hb_004126_010 Hb_003627_020--Hb_004126_010 Hb_003507_020 Hb_003507_020 Hb_003627_020--Hb_003507_020 Hb_003656_030 Hb_003656_030 Hb_003627_020--Hb_003656_030 Hb_007178_010 Hb_007178_010 Hb_003627_020--Hb_007178_010 Hb_005488_070 Hb_005488_070 Hb_003627_020--Hb_005488_070 Hb_003627_020--Hb_009510_030 Hb_000085_340 Hb_000085_340 Hb_002067_160--Hb_000085_340 Hb_005488_100 Hb_005488_100 Hb_002067_160--Hb_005488_100 Hb_004738_090 Hb_004738_090 Hb_002067_160--Hb_004738_090 Hb_002067_160--Hb_007178_010 Hb_002067_160--Hb_026048_090 Hb_002232_180 Hb_002232_180 Hb_002067_160--Hb_002232_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
228.802 16.9497 8.16909 18.2935 143.179 279.096
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
103.794 173.473 128.216 14.1309 5.35363

CAGE analysis