Hb_138585_020

Information

Type -
Description -
Location Contig138585: 8288-9478
Sequence    

Annotation

kegg
ID rcu:RCOM_1504840
description hypothetical protein
nr
ID XP_002511121.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RA96
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1504840 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138585_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_076795_010 0.2686314964 - - hypothetical protein POPTR_0001s07680g, partial [Populus trichocarpa]
3 Hb_088410_010 0.2804513793 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
4 Hb_003436_030 0.2933431739 - - plant origin recognition complex subunit, putative [Ricinus communis]
5 Hb_172388_010 0.3006533727 - - PREDICTED: uncharacterized protein LOC105633410 [Jatropha curcas]
6 Hb_002122_020 0.3020900229 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
7 Hb_002493_010 0.3054135111 - - -
8 Hb_033623_040 0.3142545882 - - JHL22C18.10 [Jatropha curcas]
9 Hb_012753_010 0.3219505264 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_002473_140 0.3236528276 - - -
11 Hb_001188_120 0.343543381 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
12 Hb_000031_350 0.3457851777 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X2 [Cucumis melo]
13 Hb_133047_020 0.3493427664 - - lysophosphatidic acid acyltransferase, putative [Ricinus communis]
14 Hb_001001_110 0.351066954 - - -
15 Hb_170156_010 0.3520827741 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_012098_190 0.3566886878 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
17 Hb_001817_030 0.3589314302 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
18 Hb_092703_010 0.3593573519 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
19 Hb_001550_050 0.3601055936 - - PREDICTED: J domain-containing protein spf31 [Eucalyptus grandis]
20 Hb_035687_010 0.3626741841 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_138585_020 Hb_138585_020 Hb_076795_010 Hb_076795_010 Hb_138585_020--Hb_076795_010 Hb_088410_010 Hb_088410_010 Hb_138585_020--Hb_088410_010 Hb_003436_030 Hb_003436_030 Hb_138585_020--Hb_003436_030 Hb_172388_010 Hb_172388_010 Hb_138585_020--Hb_172388_010 Hb_002122_020 Hb_002122_020 Hb_138585_020--Hb_002122_020 Hb_002493_010 Hb_002493_010 Hb_138585_020--Hb_002493_010 Hb_000031_350 Hb_000031_350 Hb_076795_010--Hb_000031_350 Hb_012098_190 Hb_012098_190 Hb_076795_010--Hb_012098_190 Hb_001188_120 Hb_001188_120 Hb_076795_010--Hb_001188_120 Hb_000144_040 Hb_000144_040 Hb_076795_010--Hb_000144_040 Hb_076795_010--Hb_172388_010 Hb_008730_010 Hb_008730_010 Hb_076795_010--Hb_008730_010 Hb_002473_140 Hb_002473_140 Hb_088410_010--Hb_002473_140 Hb_159938_010 Hb_159938_010 Hb_088410_010--Hb_159938_010 Hb_088410_010--Hb_002122_020 Hb_002869_070 Hb_002869_070 Hb_088410_010--Hb_002869_070 Hb_050334_010 Hb_050334_010 Hb_088410_010--Hb_050334_010 Hb_142570_010 Hb_142570_010 Hb_088410_010--Hb_142570_010 Hb_001817_030 Hb_001817_030 Hb_003436_030--Hb_001817_030 Hb_033623_040 Hb_033623_040 Hb_003436_030--Hb_033623_040 Hb_000101_150 Hb_000101_150 Hb_003436_030--Hb_000101_150 Hb_010736_030 Hb_010736_030 Hb_003436_030--Hb_010736_030 Hb_078780_010 Hb_078780_010 Hb_003436_030--Hb_078780_010 Hb_172388_010--Hb_012098_190 Hb_005803_040 Hb_005803_040 Hb_172388_010--Hb_005803_040 Hb_172388_010--Hb_008730_010 Hb_000307_230 Hb_000307_230 Hb_172388_010--Hb_000307_230 Hb_002122_020--Hb_033623_040 Hb_002122_020--Hb_002473_140 Hb_006157_050 Hb_006157_050 Hb_002122_020--Hb_006157_050 Hb_065943_010 Hb_065943_010 Hb_002122_020--Hb_065943_010 Hb_011478_010 Hb_011478_010 Hb_002122_020--Hb_011478_010 Hb_002493_010--Hb_033623_040 Hb_132384_010 Hb_132384_010 Hb_002493_010--Hb_132384_010 Hb_002493_010--Hb_002122_020 Hb_001300_250 Hb_001300_250 Hb_002493_010--Hb_001300_250 Hb_002493_010--Hb_088410_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0351615 0 0.0235306 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0775669 0.0170216 0.0861861

CAGE analysis