Hb_138585_100

Information

Type -
Description -
Location Contig138585: 74772-75725
Sequence    

Annotation

kegg
ID rcu:RCOM_1504550
description hypothetical protein
nr
ID XP_012090617.1
description PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
swissprot
ID Q99MQ1
description Protein bicaudal C homolog 1 OS=Mus musculus GN=Bicc1 PE=1 SV=1
trembl
ID A0A067JFD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26388 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138585_100 0.0 - - PREDICTED: uncharacterized protein LOC105648740 [Jatropha curcas]
2 Hb_000258_370 0.0551278054 - - hypothetical protein [Ricinus communis]
3 Hb_006054_030 0.1125428678 - - PREDICTED: protein GPR107-like [Jatropha curcas]
4 Hb_002071_050 0.121901884 - - PREDICTED: mitogen-activated protein kinase kinase 5-like [Jatropha curcas]
5 Hb_000252_210 0.1260835445 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
6 Hb_006711_070 0.1265787917 - - hypothetical protein RCOM_1336320 [Ricinus communis]
7 Hb_000270_230 0.1279373143 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
8 Hb_000117_060 0.1339038758 - - PREDICTED: uncharacterized protein LOC103949199 [Pyrus x bretschneideri]
9 Hb_103788_010 0.1353517046 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
10 Hb_000460_060 0.1404754289 - - importin beta-1, putative [Ricinus communis]
11 Hb_001133_010 0.1428040543 - - conserved hypothetical protein [Ricinus communis]
12 Hb_012107_010 0.1428201529 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
13 Hb_000134_340 0.1451484709 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Jatropha curcas]
14 Hb_004994_300 0.1470960697 - - synaptotagmin, putative [Ricinus communis]
15 Hb_010661_010 0.1478083868 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X1 [Jatropha curcas]
16 Hb_001246_120 0.1484546213 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
17 Hb_000856_020 0.1499619872 - - PREDICTED: probable beta-1,3-galactosyltransferase 19 [Jatropha curcas]
18 Hb_001369_780 0.1513900677 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000732_080 0.1529340297 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At5g45440 [Jatropha curcas]
20 Hb_000069_780 0.1534394463 - - atpob1, putative [Ricinus communis]

Gene co-expression network

sample Hb_138585_100 Hb_138585_100 Hb_000258_370 Hb_000258_370 Hb_138585_100--Hb_000258_370 Hb_006054_030 Hb_006054_030 Hb_138585_100--Hb_006054_030 Hb_002071_050 Hb_002071_050 Hb_138585_100--Hb_002071_050 Hb_000252_210 Hb_000252_210 Hb_138585_100--Hb_000252_210 Hb_006711_070 Hb_006711_070 Hb_138585_100--Hb_006711_070 Hb_000270_230 Hb_000270_230 Hb_138585_100--Hb_000270_230 Hb_000258_370--Hb_002071_050 Hb_000258_370--Hb_006711_070 Hb_000258_370--Hb_000252_210 Hb_003125_030 Hb_003125_030 Hb_000258_370--Hb_003125_030 Hb_000258_370--Hb_006054_030 Hb_000941_080 Hb_000941_080 Hb_006054_030--Hb_000941_080 Hb_001369_780 Hb_001369_780 Hb_006054_030--Hb_001369_780 Hb_000069_780 Hb_000069_780 Hb_006054_030--Hb_000069_780 Hb_001410_130 Hb_001410_130 Hb_006054_030--Hb_001410_130 Hb_006054_030--Hb_000270_230 Hb_000460_060 Hb_000460_060 Hb_006054_030--Hb_000460_060 Hb_002071_050--Hb_000252_210 Hb_001405_160 Hb_001405_160 Hb_002071_050--Hb_001405_160 Hb_009028_010 Hb_009028_010 Hb_002071_050--Hb_009028_010 Hb_001856_220 Hb_001856_220 Hb_002071_050--Hb_001856_220 Hb_005015_080 Hb_005015_080 Hb_002071_050--Hb_005015_080 Hb_007850_090 Hb_007850_090 Hb_002071_050--Hb_007850_090 Hb_010661_010 Hb_010661_010 Hb_000252_210--Hb_010661_010 Hb_127311_010 Hb_127311_010 Hb_000252_210--Hb_127311_010 Hb_000252_210--Hb_000460_060 Hb_000252_210--Hb_001856_220 Hb_000252_210--Hb_001405_160 Hb_000117_060 Hb_000117_060 Hb_006711_070--Hb_000117_060 Hb_003078_030 Hb_003078_030 Hb_006711_070--Hb_003078_030 Hb_000134_340 Hb_000134_340 Hb_006711_070--Hb_000134_340 Hb_005096_010 Hb_005096_010 Hb_006711_070--Hb_005096_010 Hb_021443_090 Hb_021443_090 Hb_006711_070--Hb_021443_090 Hb_000270_230--Hb_000069_780 Hb_000856_020 Hb_000856_020 Hb_000270_230--Hb_000856_020 Hb_000676_040 Hb_000676_040 Hb_000270_230--Hb_000676_040 Hb_001257_100 Hb_001257_100 Hb_000270_230--Hb_001257_100 Hb_000270_230--Hb_000941_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.41236 43.838 6.0613 24.3285 6.96282 9.44516
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.23568 4.90411 5.42968 5.60011 9.73903

CAGE analysis