Hb_138600_010

Information

Type -
Description -
Location Contig138600: 58-576
Sequence    

Annotation

kegg
ID tcc:TCM_028769
description Serine-threonine protein kinase, plant-type, putative
nr
ID XP_012081576.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
swissprot
ID Q8NFD2
description Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 PE=2 SV=1
trembl
ID A0A067KDD8
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_18439 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase sd2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138600_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
2 Hb_029510_010 0.1225049476 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
3 Hb_000163_280 0.1344268424 - - PREDICTED: probable E3 ubiquitin-protein ligase BAH1-like 1 [Jatropha curcas]
4 Hb_002232_290 0.1674788273 - - -
5 Hb_088542_010 0.193787831 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
6 Hb_004102_130 0.2012927931 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000250_080 0.2054235842 - - hypothetical protein B456_003G1510001, partial [Gossypium raimondii]
8 Hb_172256_010 0.2093177181 - - PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Jatropha curcas]
9 Hb_073212_010 0.2103837983 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
10 Hb_031862_170 0.2111054687 - - immunophilin, putative [Ricinus communis]
11 Hb_000101_160 0.2126459848 - - PREDICTED: uncharacterized protein LOC105133607 isoform X1 [Populus euphratica]
12 Hb_000211_080 0.219592409 - - PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Jatropha curcas]
13 Hb_005122_060 0.2208434732 - - unnamed protein product [Vitis vinifera]
14 Hb_000040_050 0.2215897071 - - PREDICTED: uncharacterized protein LOC102617857 isoform X1 [Citrus sinensis]
15 Hb_000857_050 0.2242732873 - - PREDICTED: protein YLS9 [Jatropha curcas]
16 Hb_004007_150 0.2242817982 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 4 [Jatropha curcas]
17 Hb_004531_090 0.22462771 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
18 Hb_003043_060 0.2251938301 - - -
19 Hb_000465_120 0.2258600104 - - PREDICTED: uncharacterized protein LOC105632294 [Jatropha curcas]
20 Hb_100964_010 0.2262435007 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_138600_010 Hb_138600_010 Hb_029510_010 Hb_029510_010 Hb_138600_010--Hb_029510_010 Hb_000163_280 Hb_000163_280 Hb_138600_010--Hb_000163_280 Hb_002232_290 Hb_002232_290 Hb_138600_010--Hb_002232_290 Hb_088542_010 Hb_088542_010 Hb_138600_010--Hb_088542_010 Hb_004102_130 Hb_004102_130 Hb_138600_010--Hb_004102_130 Hb_000250_080 Hb_000250_080 Hb_138600_010--Hb_000250_080 Hb_000101_210 Hb_000101_210 Hb_029510_010--Hb_000101_210 Hb_029510_010--Hb_088542_010 Hb_029510_010--Hb_002232_290 Hb_000590_080 Hb_000590_080 Hb_029510_010--Hb_000590_080 Hb_031862_170 Hb_031862_170 Hb_029510_010--Hb_031862_170 Hb_030627_040 Hb_030627_040 Hb_000163_280--Hb_030627_040 Hb_000201_040 Hb_000201_040 Hb_000163_280--Hb_000201_040 Hb_002159_030 Hb_002159_030 Hb_000163_280--Hb_002159_030 Hb_000040_050 Hb_000040_050 Hb_000163_280--Hb_000040_050 Hb_000163_280--Hb_000250_080 Hb_002232_290--Hb_031862_170 Hb_001691_050 Hb_001691_050 Hb_002232_290--Hb_001691_050 Hb_005568_070 Hb_005568_070 Hb_002232_290--Hb_005568_070 Hb_008147_030 Hb_008147_030 Hb_002232_290--Hb_008147_030 Hb_001632_010 Hb_001632_010 Hb_088542_010--Hb_001632_010 Hb_073212_010 Hb_073212_010 Hb_088542_010--Hb_073212_010 Hb_001677_050 Hb_001677_050 Hb_088542_010--Hb_001677_050 Hb_129067_010 Hb_129067_010 Hb_088542_010--Hb_129067_010 Hb_000605_010 Hb_000605_010 Hb_088542_010--Hb_000605_010 Hb_000733_040 Hb_000733_040 Hb_088542_010--Hb_000733_040 Hb_172256_010 Hb_172256_010 Hb_004102_130--Hb_172256_010 Hb_000016_180 Hb_000016_180 Hb_004102_130--Hb_000016_180 Hb_003673_020 Hb_003673_020 Hb_004102_130--Hb_003673_020 Hb_000211_080 Hb_000211_080 Hb_004102_130--Hb_000211_080 Hb_004531_090 Hb_004531_090 Hb_004102_130--Hb_004531_090 Hb_000176_170 Hb_000176_170 Hb_004102_130--Hb_000176_170 Hb_009421_030 Hb_009421_030 Hb_000250_080--Hb_009421_030 Hb_000250_080--Hb_172256_010 Hb_007348_040 Hb_007348_040 Hb_000250_080--Hb_007348_040 Hb_001486_120 Hb_001486_120 Hb_000250_080--Hb_001486_120 Hb_006882_010 Hb_006882_010 Hb_000250_080--Hb_006882_010 Hb_001433_190 Hb_001433_190 Hb_000250_080--Hb_001433_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.14851 3.14655 0.390129 1.47581 11.0043 8.08791
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 2.87963 1.68605 0.748162

CAGE analysis