Hb_138667_010

Information

Type -
Description -
Location Contig138667: 260-1533
Sequence    

Annotation

kegg
ID pop:POPTR_0005s033602
description hypothetical protein
nr
ID KDP38817.1
description hypothetical protein JCGZ_04974 [Jatropha curcas]
swissprot
ID Q40392
description TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
trembl
ID A0A067KRS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04974 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138667_010 0.0 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
2 Hb_000280_120 0.0335096094 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
3 Hb_000243_050 0.039797641 - - ADP-ribosylation factor, putative [Ricinus communis]
4 Hb_028872_040 0.0487842903 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_003938_100 0.0721729349 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007709_020 0.0807617893 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
7 Hb_168909_010 0.0932595121 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
8 Hb_001301_070 0.1176611951 - - -
9 Hb_002142_010 0.1182331268 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002585_060 0.1189460866 - - PREDICTED: uncharacterized protein LOC104899128, partial [Beta vulgaris subsp. vulgaris]
11 Hb_006013_030 0.1291705078 - - -
12 Hb_002733_050 0.136107265 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
13 Hb_114121_010 0.1384118384 - - -
14 Hb_038190_030 0.1393359338 - - -
15 Hb_000192_060 0.1400447141 - - -
16 Hb_151694_010 0.1539427848 - - PREDICTED: BURP domain-containing protein 17-like isoform X2 [Jatropha curcas]
17 Hb_003727_060 0.157578817 - - nucleic acid binding protein, putative [Ricinus communis]
18 Hb_000959_370 0.1589707803 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
19 Hb_151411_010 0.1591401287 - - -
20 Hb_000209_010 0.1643314749 - - -

Gene co-expression network

sample Hb_138667_010 Hb_138667_010 Hb_000280_120 Hb_000280_120 Hb_138667_010--Hb_000280_120 Hb_000243_050 Hb_000243_050 Hb_138667_010--Hb_000243_050 Hb_028872_040 Hb_028872_040 Hb_138667_010--Hb_028872_040 Hb_003938_100 Hb_003938_100 Hb_138667_010--Hb_003938_100 Hb_007709_020 Hb_007709_020 Hb_138667_010--Hb_007709_020 Hb_168909_010 Hb_168909_010 Hb_138667_010--Hb_168909_010 Hb_000280_120--Hb_000243_050 Hb_000280_120--Hb_168909_010 Hb_000280_120--Hb_028872_040 Hb_000280_120--Hb_003938_100 Hb_006013_030 Hb_006013_030 Hb_000280_120--Hb_006013_030 Hb_000243_050--Hb_003938_100 Hb_000243_050--Hb_168909_010 Hb_001301_070 Hb_001301_070 Hb_000243_050--Hb_001301_070 Hb_000243_050--Hb_028872_040 Hb_028872_040--Hb_007709_020 Hb_002142_010 Hb_002142_010 Hb_028872_040--Hb_002142_010 Hb_028872_040--Hb_003938_100 Hb_038190_030 Hb_038190_030 Hb_003938_100--Hb_038190_030 Hb_003938_100--Hb_001301_070 Hb_002056_140 Hb_002056_140 Hb_003938_100--Hb_002056_140 Hb_007709_020--Hb_002142_010 Hb_151694_010 Hb_151694_010 Hb_007709_020--Hb_151694_010 Hb_007709_020--Hb_000280_120 Hb_007709_020--Hb_003938_100 Hb_114121_010 Hb_114121_010 Hb_168909_010--Hb_114121_010 Hb_002733_050 Hb_002733_050 Hb_168909_010--Hb_002733_050 Hb_168909_010--Hb_001301_070 Hb_179183_010 Hb_179183_010 Hb_168909_010--Hb_179183_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0604648 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0393071 0.0675872

CAGE analysis