Hb_139002_010

Information

Type -
Description -
Location Contig139002: 3112-4666
Sequence    

Annotation

kegg
ID rcu:RCOM_0685080
description alpha-(1,4)-fucosyltransferase, putative
nr
ID XP_002526800.1
description alpha-(1,4)-fucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9C8W3
description Alpha-(1,4)-fucosyltransferase OS=Arabidopsis thaliana GN=FUT13 PE=2 SV=2
trembl
ID B9SLD1
description Alpha-(1,4)-fucosyltransferase, putative OS=Ricinus communis GN=RCOM_0685080 PE=3 SV=1
Gene Ontology
ID GO:0016021
description alpha-( )-fucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_139002_010 0.0 - - alpha-(1,4)-fucosyltransferase, putative [Ricinus communis]
2 Hb_002942_210 0.0707428566 - - alpha-2,8-sialyltransferase 8b, putative [Ricinus communis]
3 Hb_000139_260 0.0738006851 - - PREDICTED: protein phosphatase 2C 70 [Jatropha curcas]
4 Hb_004912_030 0.0811969599 transcription factor TF Family: Jumonji PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
5 Hb_008921_010 0.0832911946 - - PREDICTED: uncharacterized protein LOC105629323 [Jatropha curcas]
6 Hb_003436_020 0.0900279074 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105636276 isoform X2 [Jatropha curcas]
7 Hb_002014_040 0.0901924048 - - site-1 protease, putative [Ricinus communis]
8 Hb_000847_080 0.0903658784 - - PREDICTED: HAUS augmin-like complex subunit 3 [Jatropha curcas]
9 Hb_000115_280 0.0938899659 - - PREDICTED: glutamine--tRNA ligase [Jatropha curcas]
10 Hb_002092_080 0.0949658128 - - PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like [Jatropha curcas]
11 Hb_000130_420 0.0952439533 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]
12 Hb_001952_120 0.0952620347 - - PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Jatropha curcas]
13 Hb_000006_010 0.0952781659 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002027_060 0.0965498981 - - PREDICTED: exosome complex component RRP4 [Jatropha curcas]
15 Hb_055235_020 0.0968816763 - - PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 isoform X1 [Jatropha curcas]
16 Hb_000959_230 0.0979053766 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A [Populus euphratica]
17 Hb_000136_030 0.0999472498 - - serine/arginine rich splicing factor, putative [Ricinus communis]
18 Hb_000589_190 0.101568176 - - PREDICTED: actin-related protein 5 isoform X1 [Jatropha curcas]
19 Hb_000610_040 0.1017681506 - - PREDICTED: uncharacterized protein LOC105635307 isoform X1 [Jatropha curcas]
20 Hb_000362_170 0.1022271359 - - PREDICTED: uncharacterized protein LOC105635728 [Jatropha curcas]

Gene co-expression network

sample Hb_139002_010 Hb_139002_010 Hb_002942_210 Hb_002942_210 Hb_139002_010--Hb_002942_210 Hb_000139_260 Hb_000139_260 Hb_139002_010--Hb_000139_260 Hb_004912_030 Hb_004912_030 Hb_139002_010--Hb_004912_030 Hb_008921_010 Hb_008921_010 Hb_139002_010--Hb_008921_010 Hb_003436_020 Hb_003436_020 Hb_139002_010--Hb_003436_020 Hb_002014_040 Hb_002014_040 Hb_139002_010--Hb_002014_040 Hb_002942_210--Hb_002014_040 Hb_002942_210--Hb_008921_010 Hb_025668_010 Hb_025668_010 Hb_002942_210--Hb_025668_010 Hb_000847_080 Hb_000847_080 Hb_002942_210--Hb_000847_080 Hb_001931_030 Hb_001931_030 Hb_002942_210--Hb_001931_030 Hb_000006_010 Hb_000006_010 Hb_000139_260--Hb_000006_010 Hb_000139_260--Hb_002014_040 Hb_001005_030 Hb_001005_030 Hb_000139_260--Hb_001005_030 Hb_000139_260--Hb_004912_030 Hb_010272_010 Hb_010272_010 Hb_000139_260--Hb_010272_010 Hb_000130_420 Hb_000130_420 Hb_004912_030--Hb_000130_420 Hb_004912_030--Hb_001005_030 Hb_002092_080 Hb_002092_080 Hb_004912_030--Hb_002092_080 Hb_000243_210 Hb_000243_210 Hb_004912_030--Hb_000243_210 Hb_000362_170 Hb_000362_170 Hb_004912_030--Hb_000362_170 Hb_053079_020 Hb_053079_020 Hb_004912_030--Hb_053079_020 Hb_002054_050 Hb_002054_050 Hb_008921_010--Hb_002054_050 Hb_000959_230 Hb_000959_230 Hb_008921_010--Hb_000959_230 Hb_000589_190 Hb_000589_190 Hb_008921_010--Hb_000589_190 Hb_001804_110 Hb_001804_110 Hb_008921_010--Hb_001804_110 Hb_000610_040 Hb_000610_040 Hb_003436_020--Hb_000610_040 Hb_003645_060 Hb_003645_060 Hb_003436_020--Hb_003645_060 Hb_004267_040 Hb_004267_040 Hb_003436_020--Hb_004267_040 Hb_000487_180 Hb_000487_180 Hb_003436_020--Hb_000487_180 Hb_000563_130 Hb_000563_130 Hb_003436_020--Hb_000563_130 Hb_002301_300 Hb_002301_300 Hb_003436_020--Hb_002301_300 Hb_002014_040--Hb_000362_170 Hb_103747_020 Hb_103747_020 Hb_002014_040--Hb_103747_020 Hb_011972_020 Hb_011972_020 Hb_002014_040--Hb_011972_020 Hb_002014_040--Hb_010272_010 Hb_008226_090 Hb_008226_090 Hb_002014_040--Hb_008226_090 Hb_005895_010 Hb_005895_010 Hb_002014_040--Hb_005895_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.06577 9.11823 14.5855 9.68102 18.18 6.89139
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.1207 6.38352 5.57674 7.5573 10.5594

CAGE analysis