Hb_140049_010

Information

Type transcription factor
Description TF Family: GNAT
Location Contig140049: 4394-4954
Sequence    

Annotation

kegg
ID rcu:RCOM_0911790
description N-acetyltransferase, putative
nr
ID XP_012069663.1
description PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
swissprot
ID P05332
description Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1
trembl
ID A0A067KZ38
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02196 PE=4 SV=1
Gene Ontology
ID GO:0008080
description acyl- n-acyltransferases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10891: 4729-5021
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_140049_010 0.0 transcription factor TF Family: GNAT PREDICTED: uncharacterized protein LOC105632009 [Jatropha curcas]
2 Hb_006907_080 0.0851991089 - - PREDICTED: RPM1-interacting protein 4-like [Jatropha curcas]
3 Hb_010506_010 0.1823476501 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
4 Hb_000418_080 0.1993818557 - - PREDICTED: uncharacterized protein LOC105124652 [Populus euphratica]
5 Hb_000120_150 0.2003143948 - - hypothetical protein JCGZ_08453 [Jatropha curcas]
6 Hb_007558_020 0.2083271401 - - hypothetical protein JCGZ_17631 [Jatropha curcas]
7 Hb_004787_040 0.2164336468 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002035_110 0.2172673329 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
9 Hb_009974_020 0.2216411678 - - PREDICTED: uncharacterized protein LOC104427753 [Eucalyptus grandis]
10 Hb_000270_740 0.2227728376 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
11 Hb_104764_010 0.2283570756 - - hypothetical protein JCGZ_16024 [Jatropha curcas]
12 Hb_007317_080 0.2292955583 - - PREDICTED: ferredoxin, root R-B2 [Jatropha curcas]
13 Hb_002341_020 0.2415455825 - - PREDICTED: pyruvate decarboxylase 2 [Populus euphratica]
14 Hb_021888_120 0.2430756002 - - PREDICTED: putative CCR4-associated factor 1 homolog 8 [Jatropha curcas]
15 Hb_001675_030 0.243324457 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000891_030 0.2469374758 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
17 Hb_000343_180 0.2481358809 - - NDWp3 [Podospora anserina]
18 Hb_002686_120 0.2488974169 - - short-chain type dehydrogenase, putative [Ricinus communis]
19 Hb_012052_070 0.2502484215 - - PREDICTED: uncharacterized protein LOC105635597 [Jatropha curcas]
20 Hb_000886_030 0.2507072475 - - PREDICTED: uncharacterized protein LOC105113410 [Populus euphratica]

Gene co-expression network

sample Hb_140049_010 Hb_140049_010 Hb_006907_080 Hb_006907_080 Hb_140049_010--Hb_006907_080 Hb_010506_010 Hb_010506_010 Hb_140049_010--Hb_010506_010 Hb_000418_080 Hb_000418_080 Hb_140049_010--Hb_000418_080 Hb_000120_150 Hb_000120_150 Hb_140049_010--Hb_000120_150 Hb_007558_020 Hb_007558_020 Hb_140049_010--Hb_007558_020 Hb_004787_040 Hb_004787_040 Hb_140049_010--Hb_004787_040 Hb_006907_080--Hb_000120_150 Hb_006907_080--Hb_007558_020 Hb_006907_080--Hb_000418_080 Hb_104764_010 Hb_104764_010 Hb_006907_080--Hb_104764_010 Hb_002035_110 Hb_002035_110 Hb_006907_080--Hb_002035_110 Hb_091889_010 Hb_091889_010 Hb_010506_010--Hb_091889_010 Hb_010506_010--Hb_000120_150 Hb_010506_010--Hb_004787_040 Hb_001164_030 Hb_001164_030 Hb_010506_010--Hb_001164_030 Hb_005162_100 Hb_005162_100 Hb_010506_010--Hb_005162_100 Hb_000891_030 Hb_000891_030 Hb_000418_080--Hb_000891_030 Hb_029243_010 Hb_029243_010 Hb_000418_080--Hb_029243_010 Hb_001507_030 Hb_001507_030 Hb_000418_080--Hb_001507_030 Hb_003687_030 Hb_003687_030 Hb_000418_080--Hb_003687_030 Hb_000072_340 Hb_000072_340 Hb_000120_150--Hb_000072_340 Hb_000120_150--Hb_004787_040 Hb_000120_150--Hb_091889_010 Hb_000120_150--Hb_001164_030 Hb_000270_740 Hb_000270_740 Hb_000120_150--Hb_000270_740 Hb_000394_110 Hb_000394_110 Hb_007558_020--Hb_000394_110 Hb_001771_080 Hb_001771_080 Hb_007558_020--Hb_001771_080 Hb_000343_180 Hb_000343_180 Hb_007558_020--Hb_000343_180 Hb_002849_140 Hb_002849_140 Hb_007558_020--Hb_002849_140 Hb_002309_050 Hb_002309_050 Hb_004787_040--Hb_002309_050 Hb_170426_010 Hb_170426_010 Hb_004787_040--Hb_170426_010 Hb_004787_040--Hb_000270_740 Hb_020805_060 Hb_020805_060 Hb_004787_040--Hb_020805_060 Hb_004679_060 Hb_004679_060 Hb_004787_040--Hb_004679_060 Hb_000189_540 Hb_000189_540 Hb_004787_040--Hb_000189_540
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0960199 10.9643 2.97875 8.79601 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.16611 17.8312 8.36082 6.69303 0.168053

CAGE analysis